Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.82□□□□□ -1.64
SRSF4Q08170 ATP5LP3-201ENST00000514223 304 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 OR4R3P-201ENST00000525084 838 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC137627.1-201ENST00000545761 289 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC068993.1-201ENST00000546724 589 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 HIGD1AP17-201ENST00000554576 276 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.82□□□□□ -1.64
SRSF4Q08170 MTCO3P24-201ENST00000572729 782 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC021749.1-201ENST00000604322 607 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 AC016727.1-205ENST00000605437 569 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 MIR6809-201ENST00000612189 116 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 RNA5SP440-201ENST00000612665 119 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 LINC01808-202ENST00000641680 1116 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.82□□□□□ -1.64
SRSF4Q08170 CR848007.1-201ENST00000442354 1699 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 HSPD1P7-201ENST00000447985 1686 ntBASIC4.82□□□□□ -1.64
SRSF4Q08170 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.82□□□□□ -1.64
SRSF4Q08170 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRSF4Q08170 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SRSF4Q08170 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC092681.1-201ENST00000297369 291 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 OR10R3P-201ENST00000361688 942 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 Y_RNA.248-201ENST00000364501 109 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 SNORD65-201ENST00000391079 73 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SRSF4Q08170 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 PGBD4P8-201ENST00000412993 562 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AL121776.1-201ENST00000429337 372 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 OR2B8P-201ENST00000432841 938 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 MTCYBP34-201ENST00000439552 670 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AL591503.2-201ENST00000442314 1005 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 ZNF619P1-201ENST00000446539 752 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AC012512.1-201ENST00000446594 718 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 FTLP8-201ENST00000446770 267 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.81□□□□□ -1.64
SRSF4Q08170 IGBP1P3-201ENST00000447449 1000 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 RPL5P32-201ENST00000454085 879 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC004129.2-201ENST00000457229 287 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.81□□□□□ -1.64
SRSF4Q08170 TPT1P7-201ENST00000458300 517 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 RPL35AP19-201ENST00000469425 329 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AC091959.2-201ENST00000477363 321 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC096751.1-202ENST00000502691 1067 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 MTND2P33-201ENST00000506452 1031 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 RPL37P25-201ENST00000507308 276 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 AC109464.2-201ENST00000510242 943 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 IGLV3-24-201ENST00000517477 197 ntBASIC4.81□□□□□ -1.64
SRSF4Q08170 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.81□□□□□ -1.64
SRSF4Q08170 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
SRSF4Q08170 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms