Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
H3F3AP84243 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
H3F3AP84243 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
H3F3AP84243 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
H3F3AP84243 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
H3F3AP84243 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
H3F3AP84243 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
H3F3AP84243 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 AC008033.1-201ENST00000216407 1162 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
H3F3AP84243 RNA5SP22-201ENST00000365393 109 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 GCNT6-201ENST00000379591 934 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 SNORA11F-201ENST00000408237 128 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 UBTFL3-201ENST00000418934 1024 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.94□□□□□ -1.78
H3F3AP84243 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
H3F3AP84243 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.94□□□□□ -1.78
H3F3AP84243 CYCSP42-201ENST00000450823 238 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 MTND2P28-201ENST00000457540 1044 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.94□□□□□ -1.78
H3F3AP84243 CCDC75P1-201ENST00000469247 791 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 UBTFL6-201ENST00000477929 1024 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC025445.1-201ENST00000502728 300 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC025674.1-201ENST00000507074 324 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 AC015795.1-201ENST00000513669 327 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
H3F3AP84243 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.94□□□□□ -1.78
H3F3AP84243 SLC25A36P1-201ENST00000590111 465 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC068790.4-201ENST00000602474 263 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC008745.1-201ENST00000604064 271 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 AC090948.1-201ENST00000607464 549 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.94□□□□□ -1.78
H3F3AP84243 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.94□□□□□ -1.78
H3F3AP84243 AC007546.2-201ENST00000623996 360 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.94□□□□□ -1.78
H3F3AP84243 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.94□□□□□ -1.78
H3F3AP84243 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
H3F3AP84243 HCFC2P1-201ENST00000392864 1592 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
H3F3AP84243 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
H3F3AP84243 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.93□□□□□ -1.78
H3F3AP84243 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
H3F3AP84243 AC011155.1-201ENST00000316512 456 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 RNA5SP447-201ENST00000363749 119 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
H3F3AP84243 MTND4LP21-201ENST00000415303 295 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 RPA2P2-201ENST00000419698 796 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 AC068287.1-201ENST00000430283 295 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.93□□□□□ -1.78
H3F3AP84243 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.93□□□□□ -1.78
H3F3AP84243 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.93□□□□□ -1.78
H3F3AP84243 TRBV8-1-201ENST00000481590 279 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC012158.1-204ENST00000483430 465 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 RN7SL810P-201ENST00000493031 276 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 RNA5SP154-201ENST00000516193 111 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.93□□□□□ -1.78
H3F3AP84243 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
H3F3AP84243 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.93□□□□□ -1.78
H3F3AP84243 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.93□□□□□ -1.78
H3F3AP84243 AL160290.3-201ENST00000604869 165 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 AL356218.2-201ENST00000605264 187 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 uc_338.13-201ENST00000618243 179 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.93□□□□□ -1.78
H3F3AP84243 AL356121.2-201ENST00000624715 780 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.93□□□□□ -1.78
H3F3AP84243 AL133243.3-201ENST00000617415 3004 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
H3F3AP84243 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
H3F3AP84243 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
H3F3AP84243 AC093535.2-201ENST00000624769 2326 ntBASIC3.93□□□□□ -1.78
H3F3AP84243 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.92□□□□□ -1.78
H3F3AP84243 CUL4AP1-201ENST00000514750 1863 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
H3F3AP84243 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 AC025031.4-201ENST00000621248 3271 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms