Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCNA1P78396 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCNA1P78396 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCNA1P78396 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNA1P78396 RNU1-132P-201ENST00000364300 164 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 SNORA11F-201ENST00000408237 128 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 RNA5SP317-201ENST00000410176 116 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 RNA5SP311-201ENST00000411290 116 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNA1P78396 TCEA1P3-201ENST00000443005 880 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 EEF1A1P1-201ENST00000447052 739 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC041039.1-201ENST00000485656 536 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 RNA5SP315-201ENST00000516340 116 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 RNA5SP312-201ENST00000517068 116 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNA1P78396 OR8R1P-201ENST00000543943 764 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC090948.2-201ENST00000607363 564 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 AC090506.2-201ENST00000624521 419 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 RNA5SP196-201ENST00000625967 102 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC140479.6-201ENST00000633535 357 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCNA1P78396 HSPD1P11-201ENST00000508643 1702 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 AC104260.2-201ENST00000623551 3497 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
CCNA1P78396 AC090971.4-201ENST00000560291 1800 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNA1P78396 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCNA1P78396 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNA1P78396 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.12□□□□□ -1.59
CCNA1P78396 AC110792.3-201ENST00000595906 1614 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCNA1P78396 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 ASNSP1-204ENST00000641977 1664 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.12□□□□□ -1.59
CCNA1P78396 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCNA1P78396 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 AC008033.1-201ENST00000216407 1162 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 UBBP2-201ENST00000376781 231 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 RNU1-13P-201ENST00000384499 162 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 MIR134-201ENST00000385258 73 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 MIR3065-201ENST00000390137 79 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AL080315.1-201ENST00000406055 466 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 RNU6-628P-201ENST00000410675 107 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 SNRPFP1-201ENST00000414761 252 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 OR13Z1P-201ENST00000416141 834 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.12□□□□□ -1.59
CCNA1P78396 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.12□□□□□ -1.59
CCNA1P78396 OR4C10P-201ENST00000434991 931 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.12□□□□□ -1.59
CCNA1P78396 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.12□□□□□ -1.59
CCNA1P78396 RAB28P3-201ENST00000448325 597 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 RPS4XP12-201ENST00000461747 709 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AC037198.2-201ENST00000478845 733 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCNA1P78396 RNA5SP497-201ENST00000516081 97 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.12□□□□□ -1.59
CCNA1P78396 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.12□□□□□ -1.59
CCNA1P78396 ADAD1P2-201ENST00000588476 646 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 AL392048.1-201ENST00000613946 534 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 AC015804.1-201ENST00000622935 435 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 OR2L1P-202ENST00000641567 1023 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 MTCO1P22-201ENST00000604619 1360 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 CASC19-206ENST00000641028 1430 ntBASIC5.12□□□□□ -1.59
CCNA1P78396 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNA1P78396 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CCNA1P78396 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCNA1P78396 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCNA1P78396 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
CCNA1P78396 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNA1P78396 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNA1P78396 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCNA1P78396 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCNA1P78396 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCNA1P78396 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCNA1P78396 MIR331-201ENST00000362302 94 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms