Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 AL136164.3-201ENST00000624429 3978 ntBASIC3.86□□□□□ -1.79
UBA52P62987 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
UBA52P62987 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
UBA52P62987 RNU1-44P-201ENST00000384453 163 ntBASIC3.86□□□□□ -1.79
UBA52P62987 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.86□□□□□ -1.79
UBA52P62987 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
UBA52P62987 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.86□□□□□ -1.79
UBA52P62987 RN7SKP167-201ENST00000411047 285 ntBASIC3.86□□□□□ -1.79
UBA52P62987 ELOCP19-201ENST00000411919 318 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC007064.3-201ENST00000422608 359 ntBASIC3.86□□□□□ -1.79
UBA52P62987 MTND2P11-201ENST00000423638 648 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.86□□□□□ -1.79
UBA52P62987 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.86□□□□□ -1.79
UBA52P62987 RPL12P28-201ENST00000430852 489 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.86□□□□□ -1.79
UBA52P62987 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.86□□□□□ -1.79
UBA52P62987 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.86□□□□□ -1.79
UBA52P62987 Z95152.1-201ENST00000453556 656 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.86□□□□□ -1.79
UBA52P62987 AC093840.1-201ENST00000511599 336 ntBASIC3.86□□□□□ -1.79
UBA52P62987 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.86□□□□□ -1.79
UBA52P62987 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.86□□□□□ -1.79
UBA52P62987 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.86□□□□□ -1.79
UBA52P62987 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
UBA52P62987 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.86□□□□□ -1.79
UBA52P62987 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.86□□□□□ -1.79
UBA52P62987 FKBP1BP1-201ENST00000553366 325 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AL110118.1-201ENST00000553543 400 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.86□□□□□ -1.79
UBA52P62987 AC022726.1-201ENST00000587475 207 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC010424.2-201ENST00000607594 443 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC068831.8-201ENST00000620171 435 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AC243960.7-201ENST00000623532 707 ntBASIC3.86□□□□□ -1.79
UBA52P62987 AL606537.1-201ENST00000607258 2011 ntBASIC3.86□□□□□ -1.79
UBA52P62987 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
UBA52P62987 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
UBA52P62987 AL592148.3-201ENST00000608771 2646 ntBASIC3.86□□□□□ -1.79
UBA52P62987 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
UBA52P62987 AL031985.3-201ENST00000565390 2449 ntBASIC3.85□□□□□ -1.79
UBA52P62987 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
UBA52P62987 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBA52P62987 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.85□□□□□ -1.79
UBA52P62987 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBA52P62987 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
UBA52P62987 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBA52P62987 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.85□□□□□ -1.79
UBA52P62987 RNU1-15P-201ENST00000353977 144 ntBASIC3.85□□□□□ -1.79
UBA52P62987 RNU4-39P-201ENST00000362455 127 ntBASIC3.85□□□□□ -1.79
UBA52P62987 RNA5SP447-201ENST00000363749 119 ntBASIC3.85□□□□□ -1.79
UBA52P62987 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UBA52P62987 AL357515.1-201ENST00000402967 542 ntBASIC3.85□□□□□ -1.79
UBA52P62987 RNU4-25P-201ENST00000410569 230 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.85□□□□□ -1.79
UBA52P62987 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.85□□□□□ -1.79
UBA52P62987 RPL12P34-201ENST00000424532 479 ntBASIC3.85□□□□□ -1.79
UBA52P62987 RPL21P43-201ENST00000425440 472 ntBASIC3.85□□□□□ -1.79
UBA52P62987 IPMKP1-201ENST00000425988 855 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.85□□□□□ -1.79
UBA52P62987 RPL7P28-201ENST00000437739 740 ntBASIC3.85□□□□□ -1.79
UBA52P62987 ARAFP2-201ENST00000440565 559 ntBASIC3.85□□□□□ -1.79
UBA52P62987 MTCYBP21-201ENST00000443300 1113 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AL162591.2-201ENST00000449634 317 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.85□□□□□ -1.79
UBA52P62987 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.85□□□□□ -1.79
UBA52P62987 PPIAP21-201ENST00000464473 501 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AC105918.1-201ENST00000474399 838 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AC146944.2-203ENST00000502493 354 ntBASIC3.85□□□□□ -1.79
UBA52P62987 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.85□□□□□ -1.79
UBA52P62987 AC138409.2-202ENST00000507274 458 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AL592156.1-201ENST00000508758 304 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AC139495.1-202ENST00000513164 354 ntBASIC3.85□□□□□ -1.79
UBA52P62987 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.85□□□□□ -1.79
UBA52P62987 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.85□□□□□ -1.79
UBA52P62987 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.85□□□□□ -1.79
UBA52P62987 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.85□□□□□ -1.79
UBA52P62987 AC107016.1-201ENST00000550463 337 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.85□□□□□ -1.79
UBA52P62987 AC124068.1-201ENST00000563131 678 ntBASIC3.85□□□□□ -1.79
UBA52P62987 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.85□□□□□ -1.79
UBA52P62987 AC018555.1-201ENST00000567548 1980 ntBASIC3.85□□□□□ -1.79
UBA52P62987 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBA52P62987 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UBA52P62987 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBA52P62987 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBA52P62987 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.84□□□□□ -1.79
UBA52P62987 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
UBA52P62987 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
UBA52P62987 RNA5SP479-201ENST00000364858 117 ntBASIC3.84□□□□□ -1.79
UBA52P62987 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBA52P62987 RNA5SP397-201ENST00000391323 118 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms