Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC234771.5-201ENST00000600161 514 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC097504.2-201ENST00000608088 454 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC124016.2-201ENST00000610058 665 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 LINC01808-202ENST00000641680 1116 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RHBDL3P58872 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RHBDL3P58872 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RHBDL3P58872 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RHBDL3P58872 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RHBDL3P58872 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.93□□□□□ -1.46
RHBDL3P58872 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC021242.1-201ENST00000507315 2035 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
RHBDL3P58872 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 RNU6-398P-201ENST00000384143 109 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 RNU6-1176P-201ENST00000390955 107 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC013442.1-201ENST00000397347 228 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AL035079.1-201ENST00000405210 287 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 RPL12P9-201ENST00000412942 488 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 HYALP1-201ENST00000417674 1279 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 RPL7P4-203ENST00000430239 730 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDL3P58872 TXNP5-201ENST00000441043 315 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AURKAPS2-201ENST00000454983 333 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AC008280.2-201ENST00000455473 307 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 BX248409.1-201ENST00000455497 255 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 GYG1P1-201ENST00000460864 698 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 RN7SL738P-201ENST00000470264 297 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDL3P58872 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC016559.2-201ENST00000510759 359 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC104115.2-201ENST00000523026 687 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 CYB5AP5-201ENST00000549779 389 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDL3P58872 MIR4512-201ENST00000583257 77 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AC008745.1-201ENST00000604064 271 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AP000346.3-201ENST00000622821 210 ntBASIC5.93□□□□□ -1.46
RHBDL3P58872 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDL3P58872 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDL3P58872 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDL3P58872 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RHBDL3P58872 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDL3P58872 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
RHBDL3P58872 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDL3P58872 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 CASC19-261ENST00000641853 1638 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDL3P58872 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDL3P58872 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RHBDL3P58872 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDL3P58872 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDL3P58872 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDL3P58872 RNU5B-4P-201ENST00000363508 111 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 RNA5SP505-201ENST00000364748 108 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 RNU6-1000P-201ENST00000391066 106 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 LRRC37BP1-201ENST00000398851 714 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 AC245028.1-201ENST00000423259 256 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDL3P58872 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDL3P58872 RPL21P110-201ENST00000433345 446 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 ARF4P4-201ENST00000439608 520 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDL3P58872 DNAJC19P8-201ENST00000452887 259 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 APOOP2-201ENST00000461561 539 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDL3P58872 AC023050.1-201ENST00000498198 304 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDL3P58872 PRELID3BP4-201ENST00000515476 571 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDL3P58872 AP006289.1-201ENST00000538089 277 ntBASIC5.92□□□□□ -1.46
RHBDL3P58872 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDL3P58872 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms