Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COPAP53621 AC091932.2-201ENST00000623014 291 ntBASIC5.44□□□□□ -1.54
COPAP53621 AC017104.5-201ENST00000637647 639 ntBASIC5.44□□□□□ -1.54
COPAP53621 LINC01739-205ENST00000641890 573 ntBASIC5.44□□□□□ -1.54
COPAP53621 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
COPAP53621 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COPAP53621 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.44□□□□□ -1.54
COPAP53621 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COPAP53621 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COPAP53621 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COPAP53621 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.44□□□□□ -1.54
COPAP53621 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COPAP53621 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COPAP53621 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COPAP53621 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 RNA5SP305-201ENST00000362665 119 ntBASIC5.43□□□□□ -1.54
COPAP53621 RNU6-353P-201ENST00000364266 108 ntBASIC5.43□□□□□ -1.54
COPAP53621 RNU4-68P-201ENST00000364314 141 ntBASIC5.43□□□□□ -1.54
COPAP53621 RNA5SP223-201ENST00000365174 120 ntBASIC5.43□□□□□ -1.54
COPAP53621 RNU6-549P-201ENST00000384433 107 ntBASIC5.43□□□□□ -1.54
COPAP53621 MTCO2P31-201ENST00000402702 684 ntBASIC5.43□□□□□ -1.54
COPAP53621 EIF4A1P3-201ENST00000411521 244 ntBASIC5.43□□□□□ -1.54
COPAP53621 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.43□□□□□ -1.54
COPAP53621 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 AL158073.1-201ENST00000426848 1104 ntBASIC5.43□□□□□ -1.54
COPAP53621 CR769776.1-201ENST00000441254 787 ntBASIC5.43□□□□□ -1.54
COPAP53621 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 AC068135.1-201ENST00000446164 246 ntBASIC5.43□□□□□ -1.54
COPAP53621 AC005002.1-201ENST00000447458 540 ntBASIC5.43□□□□□ -1.54
COPAP53621 CDC42P1-201ENST00000456658 548 ntBASIC5.43□□□□□ -1.54
COPAP53621 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COPAP53621 AC109464.1-201ENST00000511091 819 ntBASIC5.43□□□□□ -1.54
COPAP53621 AC005351.1-201ENST00000511152 786 ntBASIC5.43□□□□□ -1.54
COPAP53621 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.43□□□□□ -1.54
COPAP53621 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 UBTFL10-201ENST00000528532 562 ntBASIC5.43□□□□□ -1.54
COPAP53621 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.43□□□□□ -1.54
COPAP53621 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.43□□□□□ -1.54
COPAP53621 AC095055.1-201ENST00000603472 1113 ntBASIC5.43□□□□□ -1.54
COPAP53621 AC055764.2-201ENST00000610089 670 ntBASIC5.43□□□□□ -1.54
COPAP53621 VN1R74P-201ENST00000613259 503 ntBASIC5.43□□□□□ -1.54
COPAP53621 AC019226.2-201ENST00000625973 424 ntBASIC5.43□□□□□ -1.54
COPAP53621 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.43□□□□□ -1.54
COPAP53621 BX649567.1-201ENST00000642071 1134 ntBASIC5.43□□□□□ -1.54
COPAP53621 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.43□□□□□ -1.54
COPAP53621 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPAP53621 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
COPAP53621 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.42□□□□□ -1.54
COPAP53621 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.42□□□□□ -1.54
COPAP53621 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPAP53621 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 SNORA17.1-201ENST00000362945 126 ntBASIC5.42□□□□□ -1.54
COPAP53621 AL589647.1-201ENST00000402485 466 ntBASIC5.42□□□□□ -1.54
COPAP53621 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.42□□□□□ -1.54
COPAP53621 RNU4-22P-201ENST00000411058 166 ntBASIC5.42□□□□□ -1.54
COPAP53621 RPL7P56-201ENST00000429441 717 ntBASIC5.42□□□□□ -1.54
COPAP53621 CDY14P-201ENST00000431260 1014 ntBASIC5.42□□□□□ -1.54
COPAP53621 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 CDY12P-201ENST00000440679 1015 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 RPS11P7-201ENST00000442125 465 ntBASIC5.42□□□□□ -1.54
COPAP53621 CDY13P-201ENST00000445813 1015 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC073850.1-201ENST00000449243 255 ntBASIC5.42□□□□□ -1.54
COPAP53621 CDY23P-201ENST00000451661 1014 ntBASIC5.42□□□□□ -1.54
COPAP53621 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.42□□□□□ -1.54
COPAP53621 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 RN7SL97P-201ENST00000486780 299 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 AC091912.1-201ENST00000511351 248 ntBASIC5.42□□□□□ -1.54
COPAP53621 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.42□□□□□ -1.54
COPAP53621 OR4U1P-201ENST00000554958 912 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 AC068714.1-201ENST00000559623 800 ntBASIC5.42□□□□□ -1.54
COPAP53621 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.42□□□□□ -1.54
COPAP53621 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.42□□□□□ -1.54
COPAP53621 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms