Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC1P41238 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC1P41238 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOBEC1P41238 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 NSRP1P1-201ENST00000444067 1693 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 HSPA8P18-201ENST00000439846 1928 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 RNU6-1339P-201ENST00000363574 91 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 U8.4-201ENST00000363626 134 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC1P41238 MIR765-201ENST00000390226 114 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 Y_RNA.578-201ENST00000390903 88 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.54□□□□□ -1.68
APOBEC1P41238 MIR1303-201ENST00000408625 86 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 RN7SKP16-201ENST00000410180 299 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC1P41238 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 TRGV6-201ENST00000417928 299 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC092634.2-201ENST00000428146 1010 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 GTF2IP3-201ENST00000433887 494 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC1P41238 RPL7AP61-201ENST00000443410 636 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC012512.1-201ENST00000446594 718 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 EIF2S2P2-201ENST00000447161 982 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 TCEA1P1-201ENST00000449716 880 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 IGHV5-78-201ENST00000450948 295 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC244505.3-201ENST00000454598 187 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC1P41238 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 RN7SKP265-201ENST00000516448 223 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC012339.2-201ENST00000523996 453 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 SULT1C2P2-201ENST00000562517 294 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC116553.2-201ENST00000564203 463 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC011840.5-201ENST00000582125 771 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 EIF1P6-201ENST00000600054 334 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC024060.1-201ENST00000607052 494 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC106052.1-201ENST00000608029 497 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC093799.2-201ENST00000610062 578 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC097520.1-201ENST00000624435 385 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC015726.3-201ENST00000624501 418 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AL121594.5-201ENST00000631724 573 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
APOBEC1P41238 RNF6P1-201ENST00000444889 1784 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 AC025574.1-201ENST00000554784 1653 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOBEC1P41238 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.54□□□□□ -1.68
APOBEC1P41238 C4BPAP1-201ENST00000415474 1893 ntBASIC4.54□□□□□ -1.68
APOBEC1P41238 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOBEC1P41238 AC096656.1-201ENST00000623826 1364 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.53□□□□□ -1.68
APOBEC1P41238 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOBEC1P41238 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOBEC1P41238 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
APOBEC1P41238 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
APOBEC1P41238 RNA5SP305-201ENST00000362665 119 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 SNORA73.1-201ENST00000363107 205 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 RNA5SP455-201ENST00000365190 119 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
APOBEC1P41238 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
APOBEC1P41238 LRRC37BP1-201ENST00000398851 714 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 AL078599.1-201ENST00000402075 293 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 OR51B3P-201ENST00000412287 913 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.53□□□□□ -1.68
APOBEC1P41238 BTF3P8-201ENST00000414577 526 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 TAF13P2-201ENST00000416876 286 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.53□□□□□ -1.68
APOBEC1P41238 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
APOBEC1P41238 AC092648.1-201ENST00000425870 423 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 NPM1P22-201ENST00000427761 952 ntBASIC4.53□□□□□ -1.68
APOBEC1P41238 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.53□□□□□ -1.68
APOBEC1P41238 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.53□□□□□ -1.68
APOBEC1P41238 OR10R1P-201ENST00000441524 1141 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms