Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC245028.1-201ENST00000423259 256 ntBASIC4.34□□□□□ -1.71
RPA3P35244 RPL7AP25-201ENST00000423357 805 ntBASIC4.34□□□□□ -1.71
RPA3P35244 TXNP2-201ENST00000443918 295 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AC002553.2-201ENST00000453217 340 ntBASIC4.34□□□□□ -1.71
RPA3P35244 RPS29P33-201ENST00000456717 146 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AP002371.1-201ENST00000463604 433 ntBASIC4.34□□□□□ -1.71
RPA3P35244 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPA3P35244 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AC093890.1-201ENST00000502554 540 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.34□□□□□ -1.71
RPA3P35244 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.34□□□□□ -1.71
RPA3P35244 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RPA3P35244 AC084783.1-201ENST00000565846 910 ntBASIC4.34□□□□□ -1.71
RPA3P35244 RPL12P25-202ENST00000598100 674 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AC124856.1-201ENST00000600819 896 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AC008782.1-201ENST00000603386 430 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AC233309.1-201ENST00000619522 751 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AP000346.3-201ENST00000622821 210 ntBASIC4.34□□□□□ -1.71
RPA3P35244 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.71
RPA3P35244 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPA3P35244 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.34□□□□□ -1.71
RPA3P35244 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RPA3P35244 AL132640.2-201ENST00000559968 1698 ntBASIC4.34□□□□□ -1.71
RPA3P35244 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.34□□□□□ -1.71
RPA3P35244 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPA3P35244 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPA3P35244 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPA3P35244 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPA3P35244 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RPA3P35244 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RPA3P35244 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
RPA3P35244 RPEP3-201ENST00000425462 676 ntBASIC4.33□□□□□ -1.72
RPA3P35244 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 RPL23AP1-201ENST00000428990 471 ntBASIC4.33□□□□□ -1.72
RPA3P35244 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 RAB9AP5-201ENST00000437794 597 ntBASIC4.33□□□□□ -1.72
RPA3P35244 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 RAB9AP2-201ENST00000443911 597 ntBASIC4.33□□□□□ -1.72
RPA3P35244 PTMAP3-201ENST00000447474 330 ntBASIC4.33□□□□□ -1.72
RPA3P35244 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 RPL21P126-201ENST00000470049 478 ntBASIC4.33□□□□□ -1.72
RPA3P35244 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 AP002981.1-201ENST00000517692 975 ntBASIC4.33□□□□□ -1.72
RPA3P35244 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.33□□□□□ -1.72
RPA3P35244 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 AL352979.3-201ENST00000553515 247 ntBASIC4.33□□□□□ -1.72
RPA3P35244 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.33□□□□□ -1.72
RPA3P35244 AC020763.5-201ENST00000623298 430 ntBASIC4.33□□□□□ -1.72
RPA3P35244 TMEM30CP-203ENST00000637814 1035 ntBASIC4.33□□□□□ -1.72
RPA3P35244 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
RPA3P35244 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPA3P35244 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
RPA3P35244 RAD17P1-201ENST00000418130 2042 ntBASIC4.33□□□□□ -1.72
RPA3P35244 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.32□□□□□ -1.72
RPA3P35244 IQCB2P-201ENST00000401788 1633 ntBASIC4.32□□□□□ -1.72
RPA3P35244 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.32□□□□□ -1.72
RPA3P35244 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.32□□□□□ -1.72
RPA3P35244 AC010132.2-201ENST00000295493 1043 ntBASIC4.32□□□□□ -1.72
RPA3P35244 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.32□□□□□ -1.72
RPA3P35244 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPA3P35244 MIR129-1-201ENST00000384972 72 ntBASIC4.32□□□□□ -1.72
RPA3P35244 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RPA3P35244 JKAMPP1-201ENST00000413804 919 ntBASIC4.32□□□□□ -1.72
RPA3P35244 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
RPA3P35244 AL161631.1-201ENST00000417933 486 ntBASIC4.32□□□□□ -1.72
RPA3P35244 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.32□□□□□ -1.72
RPA3P35244 CNOT7P1-201ENST00000429006 852 ntBASIC4.32□□□□□ -1.72
RPA3P35244 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.32□□□□□ -1.72
RPA3P35244 AC011998.1-201ENST00000433403 117 ntBASIC4.32□□□□□ -1.72
RPA3P35244 CEACAMP9-201ENST00000442990 513 ntBASIC4.32□□□□□ -1.72
RPA3P35244 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.32□□□□□ -1.72
RPA3P35244 MTND6P32-201ENST00000457611 483 ntBASIC4.32□□□□□ -1.72
RPA3P35244 snoU13.1-201ENST00000459157 104 ntBASIC4.32□□□□□ -1.72
RPA3P35244 RPL7P22-201ENST00000466005 733 ntBASIC4.32□□□□□ -1.72
RPA3P35244 RPL35AP15-201ENST00000468042 339 ntBASIC4.32□□□□□ -1.72
RPA3P35244 AC006517.1-201ENST00000480485 328 ntBASIC4.32□□□□□ -1.72
RPA3P35244 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.32□□□□□ -1.72
RPA3P35244 RNA5SP228-201ENST00000516232 133 ntBASIC4.32□□□□□ -1.72
RPA3P35244 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.32□□□□□ -1.72
RPA3P35244 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.32□□□□□ -1.72
RPA3P35244 AP000827.1-201ENST00000527814 258 ntBASIC4.32□□□□□ -1.72
RPA3P35244 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
RPA3P35244 MIR4727-201ENST00000622232 55 ntBASIC4.32□□□□□ -1.72
RPA3P35244 FP325313.1-201ENST00000638228 703 ntBASIC4.32□□□□□ -1.72
RPA3P35244 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RPA3P35244 MFSD8-216ENST00000641147 4009 ntBASIC4.32□□□□□ -1.72
RPA3P35244 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms