Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU6-1263P-201ENST00000384601 106 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 MIR659-201ENST00000384963 97 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHMT2P34897 AL160275.2-201ENST00000412010 394 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 VDAC1P9-201ENST00000412766 841 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 OR51A6P-201ENST00000418680 1004 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AC013470.3-201ENST00000420252 1194 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHMT2P34897 RPS27AP7-201ENST00000422792 455 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 RPL7AP25-201ENST00000423357 805 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 RPL23AP25-201ENST00000430973 463 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHMT2P34897 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.37□□□□□ -1.71
SHMT2P34897 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.37□□□□□ -1.71
SHMT2P34897 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SHMT2P34897 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.37□□□□□ -1.71
SHMT2P34897 RNA5SP446-201ENST00000515955 82 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 RAB9BP1-201ENST00000519581 626 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AC022882.1-201ENST00000532142 501 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 MTND6P33-201ENST00000571794 183 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AC027455.1-201ENST00000574104 594 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AC027281.1-201ENST00000574178 758 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AC008745.1-201ENST00000604064 271 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.37□□□□□ -1.71
SHMT2P34897 AC012409.3-201ENST00000611343 981 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 LINC00901.1-201ENST00000617252 152 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHMT2P34897 AP002967.1-201ENST00000624203 539 ntBASIC4.37□□□□□ -1.71
SHMT2P34897 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.37□□□□□ -1.71
SHMT2P34897 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SHMT2P34897 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SHMT2P34897 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHMT2P34897 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.37□□□□□ -1.71
SHMT2P34897 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.36□□□□□ -1.71
SHMT2P34897 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.36□□□□□ -1.71
SHMT2P34897 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SHMT2P34897 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 SNORA56-201ENST00000383966 129 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 RNU6-1320P-201ENST00000390838 107 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 RNU6-1269P-201ENST00000391139 107 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.36□□□□□ -1.71
SHMT2P34897 AL512430.2-201ENST00000406786 339 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
SHMT2P34897 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 TRIM60P17-201ENST00000415181 719 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AL807761.1-201ENST00000417622 171 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC007064.3-201ENST00000422608 359 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 GTF2IP2-201ENST00000424290 697 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AP001324.1-201ENST00000428553 399 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.36□□□□□ -1.71
SHMT2P34897 RPL21P91-201ENST00000429231 479 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 MAPRE1P3-201ENST00000435438 796 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 H2AFZP6-201ENST00000444403 394 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 CYCSP42-201ENST00000450823 238 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC012671.1-201ENST00000451912 203 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 Z95152.1-201ENST00000453556 656 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 RNU6-599P-201ENST00000459383 107 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 RNU6-1193P-201ENST00000459461 107 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC107015.1-201ENST00000466902 747 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 UBA52P3-201ENST00000491303 382 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.36□□□□□ -1.71
SHMT2P34897 OR52A4P-203ENST00000498233 1014 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.36□□□□□ -1.71
SHMT2P34897 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 PDCD5P1-201ENST00000543528 309 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 FAM106CP-201ENST00000582212 507 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.36□□□□□ -1.71
SHMT2P34897 AC005191.1-201ENST00000603950 358 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 AL035461.2-201ENST00000619201 524 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 RNU6-368P-201ENST00000620928 107 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 RNU6-538P-201ENST00000622329 107 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.36□□□□□ -1.71
SHMT2P34897 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SHMT2P34897 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
SHMT2P34897 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 AL356317.1-201ENST00000396110 1436 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SHMT2P34897 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHMT2P34897 AC107021.2-201ENST00000567714 2095 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 MTCO1P8-201ENST00000416914 1523 ntBASIC4.36□□□□□ -1.71
SHMT2P34897 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHMT2P34897 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHMT2P34897 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHMT2P34897 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms