Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA13P31271 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA13P31271 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA13P31271 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXA13P31271 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
HOXA13P31271 RNU6-532P-201ENST00000384318 107 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA13P31271 AC136624.1-201ENST00000400791 413 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 ELOCP19-201ENST00000411919 318 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AC013410.2-201ENST00000422627 201 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA13P31271 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA13P31271 TDGF1P1-201ENST00000445734 527 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA13P31271 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AL133244.1-201ENST00000456007 258 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 EIF2S2P5-201ENST00000457635 968 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA13P31271 AC037198.2-201ENST00000478845 733 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 NPM1P17-201ENST00000479221 602 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AC107398.1-201ENST00000486904 505 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 HMGB3P16-201ENST00000508037 287 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 RN7SKP141-201ENST00000516167 338 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA13P31271 OR8X1P-201ENST00000534542 869 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA13P31271 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA13P31271 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA13P31271 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA13P31271 AC115286.1-201ENST00000604298 434 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AC110792.4-201ENST00000609843 298 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 AC097460.3-201ENST00000623099 442 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA13P31271 AC119674.1-212ENST00000641155 993 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 OR56B2P-202ENST00000641377 2453 ntBASIC5.23□□□□□ -1.57
HOXA13P31271 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA13P31271 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HOXA13P31271 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 ZNF90P1-201ENST00000480493 1951 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA13P31271 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
HOXA13P31271 AL359922.3-201ENST00000624779 1670 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA13P31271 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
HOXA13P31271 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXA13P31271 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA13P31271 RPS12P10-201ENST00000427031 377 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AP001324.1-201ENST00000428553 399 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AC073143.1-201ENST00000436316 395 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA13P31271 AL935212.3-201ENST00000450729 284 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 ISCUP1-201ENST00000454451 448 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AC090602.1-201ENST00000469695 252 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 MTND3P3-201ENST00000505004 126 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AC025674.1-201ENST00000507074 324 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA13P31271 AC108120.2-201ENST00000512973 294 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 IGLVIV-65-201ENST00000517313 360 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA13P31271 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA13P31271 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA13P31271 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA13P31271 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA13P31271 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA13P31271 AC012409.3-201ENST00000611343 981 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AC083809.1-201ENST00000615051 472 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 AC253576.2-201ENST00000618815 580 ntBASIC5.22□□□□□ -1.57
HOXA13P31271 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA13P31271 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
HOXA13P31271 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA13P31271 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.21□□□□□ -1.57
HOXA13P31271 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA13P31271 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
HOXA13P31271 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA13P31271 SALL4P2-201ENST00000423288 2910 ntBASIC5.21□□□□□ -1.57
HOXA13P31271 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA13P31271 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA13P31271 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA13P31271 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXA13P31271 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA13P31271 MIR16-2-201ENST00000362117 81 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 RNU6-666P-201ENST00000363499 107 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 RPL23AP59-201ENST00000399415 461 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 ATP5F1P6-201ENST00000402768 767 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL592291.1-201ENST00000403830 352 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA13P31271 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA13P31271 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 GTF3AP5-201ENST00000442645 697 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA13P31271 AC026979.1-201ENST00000492525 396 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 MTCO2P9-201ENST00000503214 694 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXA13P31271 RNA5SP303-201ENST00000516192 130 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms