Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL121878.1-201ENST00000418638 859 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 AC091959.2-201ENST00000477363 321 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 RN7SL132P-201ENST00000478131 296 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
CLIP1P30622 AC023509.5-201ENST00000617434 807 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 AC010608.2-201ENST00000624830 470 ntBASIC6.67□□□□□ -1.34
CLIP1P30622 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CLIP1P30622 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.66□□□□□ -1.34
CLIP1P30622 AC108032.1-201ENST00000416706 207 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP1P30622 AC115285.1-201ENST00000424879 736 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 AL451062.2-201ENST00000427515 271 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 AC022034.3-201ENST00000471393 478 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 FTH1P21-201ENST00000512179 511 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 RNU6-513P-201ENST00000516104 104 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 SNORA67.7-201ENST00000516664 135 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 MIR3158-1-201ENST00000583596 81 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.66□□□□□ -1.34
CLIP1P30622 AC114878.2-201ENST00000604863 1251 ntBASIC6.66□□□□□ -1.34
CLIP1P30622 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.66□□□□□ -1.34
CLIP1P30622 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP1P30622 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CLIP1P30622 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CLIP1P30622 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP1P30622 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
CLIP1P30622 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
CLIP1P30622 AC067945.1-201ENST00000342609 618 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 RNA5SP171-201ENST00000391071 115 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CLIP1P30622 RN7SKP202-201ENST00000410439 330 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 TRGV7-201ENST00000427089 353 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.65□□□□□ -1.35
CLIP1P30622 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.65□□□□□ -1.35
CLIP1P30622 ARL4AP3-201ENST00000441452 574 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 AC012158.1-204ENST00000483430 465 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.65□□□□□ -1.35
CLIP1P30622 AC008694.2-201ENST00000517591 306 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 PHBP17-201ENST00000528576 541 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.65□□□□□ -1.35
CLIP1P30622 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.65□□□□□ -1.35
CLIP1P30622 AC053481.4-201ENST00000583164 216 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 MIR6875-201ENST00000617506 72 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 AL356863.1-201ENST00000623378 1080 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 AC112200.1-201ENST00000625015 234 ntBASIC6.65□□□□□ -1.35
CLIP1P30622 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
CLIP1P30622 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.65□□□□□ -1.35
CLIP1P30622 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.64□□□□□ -1.35
CLIP1P30622 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP1P30622 AL022311.1-201ENST00000623726 19416 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.64□□□□□ -1.35
CLIP1P30622 MAPK10-303ENST00000641324 3959 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 OR11H4-201ENST00000315409 1082 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP1P30622 AC006011.1-201ENST00000442758 349 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 RPL23AP2-201ENST00000471227 466 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 NDUFB4P12-201ENST00000513465 390 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.64□□□□□ -1.35
CLIP1P30622 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP1P30622 MIR5684-201ENST00000585074 65 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP1P30622 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP1P30622 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP1P30622 AC064801.1-201ENST00000612025 407 ntBASIC6.64□□□□□ -1.35
CLIP1P30622 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP1P30622 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CLIP1P30622 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP1P30622 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP1P30622 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP1P30622 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP1P30622 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP1P30622 AC083843.2-201ENST00000568248 6253 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 RLIMP1-201ENST00000339626 1680 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.63□□□□□ -1.35
CLIP1P30622 AL161631.1-201ENST00000417933 486 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 RPL36AP13-201ENST00000457490 317 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP1P30622 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.63□□□□□ -1.35
CLIP1P30622 KRT19P6-201ENST00000510983 209 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 NPM1P21-201ENST00000513394 762 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 RNA5SP143-201ENST00000516936 115 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 AC023632.4-201ENST00000517783 191 ntBASIC6.63□□□□□ -1.35
CLIP1P30622 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.63□□□□□ -1.35
CLIP1P30622 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CLIP1P30622 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CLIP1P30622 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP1P30622 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.63□□□□□ -1.35
CLIP1P30622 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.63□□□□□ -1.35
CLIP1P30622 Z95331.1-201ENST00000623075 23112 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP1P30622 RNA5SP372-201ENST00000390836 115 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP1P30622 RBMY1KP-201ENST00000423480 476 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 RPS29P7-201ENST00000439662 171 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP1P30622 AC146944.2-203ENST00000502493 354 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CLIP1P30622 BTG4P1-201ENST00000510421 183 ntBASIC6.62□□□□□ -1.35
CLIP1P30622 AC139495.1-202ENST00000513164 354 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms