Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPREP23469 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPREP23469 RPL7AP51-201ENST00000422016 760 ntBASIC8.11□□□□□ -1.11
PTPREP23469 DPH3P2-201ENST00000422618 250 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RGS17P1-201ENST00000423358 553 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AC007365.2-201ENST00000428806 458 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AL121916.1-201ENST00000429405 308 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RPL34P6-201ENST00000432390 345 ntBASIC8.11□□□□□ -1.11
PTPREP23469 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AL138899.2-201ENST00000439139 499 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AC007383.1-201ENST00000445875 636 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RPL7P59-201ENST00000447700 943 ntBASIC8.11□□□□□ -1.11
PTPREP23469 PRDX1P1-201ENST00000449329 596 ntBASIC8.11□□□□□ -1.11
PTPREP23469 TRGVB-201ENST00000453257 471 ntBASIC8.11□□□□□ -1.11
PTPREP23469 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPREP23469 AC104849.1-201ENST00000462623 405 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RPL5P30-201ENST00000465511 891 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AL163973.1-201ENST00000484753 577 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RN7SL143P-201ENST00000496780 297 ntBASIC8.11□□□□□ -1.11
PTPREP23469 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 SCARNA6-201ENST00000515982 265 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RNA5SP473-201ENST00000516402 125 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RPL7P20-201ENST00000520308 745 ntBASIC8.11□□□□□ -1.11
PTPREP23469 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPREP23469 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPREP23469 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
PTPREP23469 NCAPGP2-201ENST00000557911 754 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPREP23469 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPREP23469 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPREP23469 AC011500.1-201ENST00000601963 469 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AC007255.2-201ENST00000604053 631 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AC098479.1-201ENST00000609225 154 ntBASIC8.11□□□□□ -1.11
PTPREP23469 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.11□□□□□ -1.11
PTPREP23469 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPREP23469 AC011471.4-201ENST00000638271 216 ntBASIC8.11□□□□□ -1.11
PTPREP23469 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 GTF2H2B-203ENST00000508065 1432 ntBASIC8.11□□□□□ -1.11
PTPREP23469 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 NCOA4P3-201ENST00000513203 1877 ntBASIC8.11□□□□□ -1.11
PTPREP23469 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PTPREP23469 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 AC092111.1-201ENST00000618256 3358 ntBASIC8.1□□□□□ -1.11
PTPREP23469 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 NLRP3P1-201ENST00000622303 1785 ntBASIC8.1□□□□□ -1.11
PTPREP23469 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPREP23469 RPL12P13-201ENST00000310055 497 ntBASIC8.1□□□□□ -1.11
PTPREP23469 RNU6-996P-201ENST00000365438 107 ntBASIC8.1□□□□□ -1.11
PTPREP23469 RN7SKP62-201ENST00000384539 329 ntBASIC8.1□□□□□ -1.11
PTPREP23469 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PTPREP23469 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PTPREP23469 BTBD10P2-201ENST00000404779 676 ntBASIC8.1□□□□□ -1.11
PTPREP23469 RPL31P52-201ENST00000407532 367 ntBASIC8.1□□□□□ -1.11
PTPREP23469 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPREP23469 RPL37P10-201ENST00000412884 288 ntBASIC8.1□□□□□ -1.11
PTPREP23469 RPL23AP30-201ENST00000432419 501 ntBASIC8.1□□□□□ -1.11
PTPREP23469 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPREP23469 SNRPEP7-201ENST00000438350 220 ntBASIC8.1□□□□□ -1.11
PTPREP23469 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPREP23469 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPREP23469 RPS18P1-201ENST00000447840 458 ntBASIC8.1□□□□□ -1.11
PTPREP23469 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPREP23469 AL034399.1-201ENST00000451535 380 ntBASIC8.1□□□□□ -1.11
PTPREP23469 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPREP23469 RPL32P9-201ENST00000487963 407 ntBASIC8.1□□□□□ -1.11
PTPREP23469 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.1□□□□□ -1.11
PTPREP23469 OR4D12P-201ENST00000509361 911 ntBASIC8.1□□□□□ -1.11
PTPREP23469 AC006499.2-201ENST00000513470 337 ntBASIC8.1□□□□□ -1.11
PTPREP23469 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 OR4R1P-201ENST00000529879 463 ntBASIC8.1□□□□□ -1.11
PTPREP23469 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPREP23469 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPREP23469 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 AC018889.1-201ENST00000605372 397 ntBASIC8.1□□□□□ -1.11
PTPREP23469 AC104184.1-201ENST00000607513 721 ntBASIC8.1□□□□□ -1.11
PTPREP23469 AP004247.3-201ENST00000608682 624 ntBASIC8.1□□□□□ -1.11
PTPREP23469 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPREP23469 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms