Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH3P20585 RPL23AP23-201ENST00000452590 471 ntBASIC4.74□□□□□ -1.65
MSH3P20585 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH3P20585 HSPE1P22-201ENST00000456856 327 ntBASIC4.74□□□□□ -1.65
MSH3P20585 RPL32P14-201ENST00000463196 378 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AC092324.1-201ENST00000468671 324 ntBASIC4.74□□□□□ -1.65
MSH3P20585 RPL21P6-201ENST00000479171 504 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AC104971.1-201ENST00000495117 578 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AP003355.1-201ENST00000518956 587 ntBASIC4.74□□□□□ -1.65
MSH3P20585 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.74□□□□□ -1.65
MSH3P20585 AC018442.3-201ENST00000523025 183 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH3P20585 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH3P20585 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.74□□□□□ -1.65
MSH3P20585 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH3P20585 AC122134.1-201ENST00000565664 1104 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH3P20585 MIR4675-201ENST00000577898 77 ntBASIC4.74□□□□□ -1.65
MSH3P20585 MIR5699-201ENST00000578903 90 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH3P20585 AC068620.3-201ENST00000602749 560 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AL512782.1-201ENST00000603093 364 ntBASIC4.74□□□□□ -1.65
MSH3P20585 MTCO2P22-201ENST00000603246 681 ntBASIC4.74□□□□□ -1.65
MSH3P20585 AC024940.4-201ENST00000605507 246 ntBASIC4.74□□□□□ -1.65
MSH3P20585 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH3P20585 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.74□□□□□ -1.65
MSH3P20585 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.74□□□□□ -1.65
MSH3P20585 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
MSH3P20585 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH3P20585 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 AL359715.4-201ENST00000606629 1436 ntBASIC4.73□□□□□ -1.65
MSH3P20585 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MSH3P20585 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 AL035419.1-201ENST00000397037 564 ntBASIC4.73□□□□□ -1.65
MSH3P20585 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 AL139128.1-201ENST00000413921 941 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 MTCYBP7-201ENST00000419540 1134 ntBASIC4.73□□□□□ -1.65
MSH3P20585 E2F6P2-201ENST00000420708 748 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 BX119904.1-201ENST00000432026 348 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AL645931.1-201ENST00000439737 410 ntBASIC4.73□□□□□ -1.65
MSH3P20585 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
MSH3P20585 RPS6P2-201ENST00000454208 705 ntBASIC4.73□□□□□ -1.65
MSH3P20585 RPL35AP28-201ENST00000459730 331 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.73□□□□□ -1.65
MSH3P20585 AC091868.1-201ENST00000508746 304 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 RN7SKP276-201ENST00000516242 268 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH3P20585 AC087477.6-201ENST00000559595 843 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 AC093249.4-201ENST00000564755 259 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 MIR4737-201ENST00000583979 81 ntBASIC4.73□□□□□ -1.65
MSH3P20585 MIR4443-201ENST00000585052 53 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 AC079880.2-201ENST00000603790 1213 ntBASIC4.73□□□□□ -1.65
MSH3P20585 SNORD91B-202ENST00000608459 222 ntBASIC4.73□□□□□ -1.65
MSH3P20585 FAM25E-202ENST00000608562 189 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC112503.2-201ENST00000609005 552 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AP001784.1-201ENST00000624107 428 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AC011815.3-201ENST00000624194 473 ntBASIC4.73□□□□□ -1.65
MSH3P20585 AP003485.1-201ENST00000625093 753 ntBASIC4.73□□□□□ -1.65
MSH3P20585 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MSH3P20585 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH3P20585 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH3P20585 AC007382.1-201ENST00000624376 2618 ntBASIC4.73□□□□□ -1.65
MSH3P20585 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
MSH3P20585 AC000123.3-201ENST00000624029 4975 ntBASIC4.72□□□□□ -1.65
MSH3P20585 MIR16-2-201ENST00000362117 81 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms