Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC073137.1-201ENST00000605636 634 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AC114781.5-201ENST00000615297 108 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL445567.2-201ENST00000618935 498 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 AL109659.3-201ENST00000624985 950 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC6P09630 MAPK10-304ENST00000641341 3984 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC6P09630 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC6P09630 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
HOXC6P09630 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC6P09630 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
HOXC6P09630 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC6P09630 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC6P09630 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXC6P09630 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HOXC6P09630 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HOXC6P09630 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HOXC6P09630 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 RNA5SP28-201ENST00000363841 119 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 MTCO2P23-201ENST00000425216 680 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 XKRY2-201ENST00000442362 1093 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC6P09630 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC104763.1-201ENST00000475274 360 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 RPL23AP73-201ENST00000492507 471 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC026402.1-201ENST00000513642 170 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 SNORA70.11-201ENST00000515987 138 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 SNORA70.13-201ENST00000516116 138 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AC104115.2-201ENST00000523026 687 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 AC093227.2-201ENST00000589357 285 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 AC024941.1-201ENST00000612250 334 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 AP000484.1-201ENST00000620067 1252 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AC079298.2-201ENST00000623885 459 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AC004777.1-201ENST00000624317 287 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.28□□□□□ -1.56
HOXC6P09630 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXC6P09630 AL121950.1-201ENST00000624993 2077 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 AC068870.3-201ENST00000625077 2536 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 MTCO1P7-201ENST00000419523 1542 ntBASIC5.28□□□□□ -1.56
HOXC6P09630 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC6P09630 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC6P09630 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC6P09630 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC6P09630 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC6P09630 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC6P09630 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC6P09630 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC6P09630 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
HOXC6P09630 RNU6-609P-201ENST00000365459 107 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 MIR659-201ENST00000384963 97 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC6P09630 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC6P09630 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC6P09630 AC104333.2-201ENST00000422630 192 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 MTND4LP13-201ENST00000425022 298 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 MORF4L1P7-201ENST00000426038 703 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 HMGB3P5-201ENST00000428894 612 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 AL512637.2-201ENST00000431287 1256 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 AC122718.1-201ENST00000439448 744 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC6P09630 MTCYBP11-201ENST00000447254 1109 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 FAM133DP-201ENST00000464802 691 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 AC090142.1-201ENST00000465776 462 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC6P09630 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXC6P09630 PRELID3BP6-201ENST00000503839 571 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC6P09630 RNU6-943P-201ENST00000516960 98 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 RNU6-889P-201ENST00000517189 103 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 AC010476.1-201ENST00000519111 851 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 MTND2P32-201ENST00000521584 1038 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms