Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.52□□□□□ -1.53
COL5A2P05997 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.52□□□□□ -1.53
COL5A2P05997 HPRT1P2-201ENST00000505250 544 ntBASIC5.52□□□□□ -1.53
COL5A2P05997 PAICSP4-201ENST00000517543 1253 ntBASIC5.52□□□□□ -1.53
COL5A2P05997 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 MIR5684-201ENST00000585074 65 ntBASIC5.52□□□□□ -1.53
COL5A2P05997 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.52□□□□□ -1.53
COL5A2P05997 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COL5A2P05997 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.52□□□□□ -1.53
COL5A2P05997 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
COL5A2P05997 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.52□□□□□ -1.53
COL5A2P05997 AC093297.3-201ENST00000607056 2517 ntBASIC5.52□□□□□ -1.53
COL5A2P05997 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL5A2P05997 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.51□□□□□ -1.53
COL5A2P05997 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.51□□□□□ -1.53
COL5A2P05997 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.51□□□□□ -1.53
COL5A2P05997 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 RPL7P49-201ENST00000471402 708 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 RPS4XP15-201ENST00000489210 795 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 SNORA74D-201ENST00000516404 141 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL5A2P05997 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 AC096553.1-201ENST00000605169 829 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 AC008966.2-201ENST00000606157 453 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL5A2P05997 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.51□□□□□ -1.53
COL5A2P05997 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL5A2P05997 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 RNU6-233P-201ENST00000410845 141 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 AC068533.1-201ENST00000418542 415 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.51□□□□□ -1.53
COL5A2P05997 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.51□□□□□ -1.53
COL5A2P05997 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.51□□□□□ -1.53
COL5A2P05997 OR4A2P-201ENST00000527276 913 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.51□□□□□ -1.53
COL5A2P05997 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.51□□□□□ -1.53
COL5A2P05997 AC090953.1-201ENST00000604305 1092 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 AC234782.5-201ENST00000617723 324 ntBASIC5.51□□□□□ -1.53
COL5A2P05997 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL5A2P05997 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL5A2P05997 CASC19-284ENST00000642142 1868 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL5A2P05997 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL5A2P05997 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
COL5A2P05997 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL5A2P05997 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL5A2P05997 SNORA5A-201ENST00000384111 134 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 RNU6-316P-201ENST00000391027 107 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 MIR1179-201ENST00000408703 91 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.5□□□□□ -1.53
COL5A2P05997 AC114814.2-201ENST00000419195 485 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 AC012497.1-201ENST00000429392 575 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.5□□□□□ -1.53
COL5A2P05997 KATNBL1P2-201ENST00000433311 835 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.5□□□□□ -1.53
COL5A2P05997 AC006011.1-201ENST00000442758 349 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 RPS4XP4-201ENST00000443195 763 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.5□□□□□ -1.53
COL5A2P05997 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.5□□□□□ -1.53
COL5A2P05997 IMMP1LP1-201ENST00000605170 488 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 AL357559.1-201ENST00000622228 274 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 FP236240.3-201ENST00000623061 327 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.5□□□□□ -1.53
COL5A2P05997 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.5□□□□□ -1.53
COL5A2P05997 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL5A2P05997 ZNF285B-201ENST00000561698 1767 ntBASIC5.5□□□□□ -1.53
COL5A2P05997 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A2P05997 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A2P05997 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.49□□□□□ -1.53
COL5A2P05997 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL5A2P05997 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
COL5A2P05997 RN7SKP156-201ENST00000410308 342 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 OR5BE1P-201ENST00000425977 939 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 AC091390.3-201ENST00000426478 338 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.49□□□□□ -1.53
COL5A2P05997 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.49□□□□□ -1.53
COL5A2P05997 NPM1P34-201ENST00000428821 893 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 RPL23AP25-201ENST00000430973 463 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 AC114982.2-201ENST00000461396 358 ntBASIC5.49□□□□□ -1.53
COL5A2P05997 RPS4XP18-201ENST00000495480 763 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms