Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC007497.1-201ENST00000610421 561 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC253576.2-201ENST00000618815 580 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AL669942.2-201ENST00000620352 697 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.35□□□□□ -1.71
MT-ND1P03886 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AL512283.1-201ENST00000606756 1384 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AL118496.1-201ENST00000440201 1812 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AL031119.1-201ENST00000404707 1879 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC087190.4-201ENST00000574616 8334 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
MT-ND1P03886 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.34□□□□□ -1.71
MT-ND1P03886 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 RNU4-31P-201ENST00000384211 141 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 U3.30-201ENST00000391308 210 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 GSTM3P2-201ENST00000412746 530 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC013404.1-201ENST00000413068 249 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC105402.1-201ENST00000413336 545 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC114755.2-201ENST00000413520 361 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC004690.1-201ENST00000418216 328 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 NPM1P24-201ENST00000428039 894 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 RPL21P91-201ENST00000429231 479 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.34□□□□□ -1.71
MT-ND1P03886 HMGB3P9-201ENST00000441799 583 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.34□□□□□ -1.71
MT-ND1P03886 RPS27AP15-201ENST00000447672 466 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 MYO5BP2-201ENST00000449815 1277 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC239809.1-201ENST00000450470 217 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC079168.2-201ENST00000453977 416 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC006499.3-201ENST00000506077 748 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.34□□□□□ -1.71
MT-ND1P03886 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 RNA5SP34-201ENST00000516887 130 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 MORF4L1P3-201ENST00000525966 950 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AP003049.1-201ENST00000529418 457 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC133555.2-201ENST00000550213 292 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 CKS1BP1-201ENST00000555221 240 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC090515.3-201ENST00000560431 315 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 RN7SL802P-201ENST00000577858 299 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.34□□□□□ -1.71
MT-ND1P03886 AC011487.3-201ENST00000593607 453 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 RPL26P30-202ENST00000602923 645 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC020910.3-201ENST00000603701 874 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AC011815.3-201ENST00000624194 473 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 AL138960.2-201ENST00000625145 535 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.34□□□□□ -1.71
MT-ND1P03886 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.34□□□□□ -1.71
MT-ND1P03886 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.34□□□□□ -1.71
MT-ND1P03886 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.34□□□□□ -1.71
MT-ND1P03886 CASC19-222ENST00000641321 1173 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 CCT8P1-201ENST00000413611 1657 ntBASIC4.34□□□□□ -1.71
MT-ND1P03886 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MT-ND1P03886 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
MT-ND1P03886 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
MT-ND1P03886 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MT-ND1P03886 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.33□□□□□ -1.72
MT-ND1P03886 MTCO1P11-201ENST00000429111 1528 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 RNU6-185P-201ENST00000384421 107 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 MIR765-201ENST00000390226 114 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AL356057.1-202ENST00000402263 756 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 SNORA11.3-201ENST00000408471 128 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 VDAC1P9-201ENST00000412766 841 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AC093162.1-201ENST00000419682 124 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AL160175.1-201ENST00000428124 247 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC073069.1-201ENST00000428657 441 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AL357520.1-201ENST00000441557 453 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 EEF1B2P5-201ENST00000444820 548 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC073850.1-201ENST00000449243 255 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC234781.3-201ENST00000452540 973 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AL645937.3-201ENST00000453647 936 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.33□□□□□ -1.72
MT-ND1P03886 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AC005532.2-201ENST00000467154 373 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms