Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 RN7SKP182-201ENST00000410772 298 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC234781.4-201ENST00000419384 244 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 RPA2P2-201ENST00000419698 796 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 CHIAP3-201ENST00000423668 1133 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 ELOCP8-201ENST00000439309 332 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 ELOCP15-201ENST00000442090 332 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTDNEP1O95476 RN7SL481P-201ENST00000477764 299 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC108475.1-201ENST00000507880 950 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTDNEP1O95476 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC079171.1-201ENST00000568788 914 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 RN7SL600P-201ENST00000581811 299 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 MIR6820-201ENST00000611508 62 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 MIR7702-201ENST00000621931 59 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTDNEP1O95476 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 LARP1BP1-201ENST00000506036 1359 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 RPL23AP26-201ENST00000412728 464 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 RPL18P10-201ENST00000425606 538 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 DNAJC19P7-201ENST00000428811 344 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 MTCO1P54-201ENST00000430139 712 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 COX6B1P7-201ENST00000430845 235 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AL358472.1-201ENST00000431295 329 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 ACTR3P2-201ENST00000439585 1257 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 RNA5SP154-201ENST00000516193 111 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 RNA5SP228-201ENST00000516232 133 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 TVP23BP1-201ENST00000557500 617 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 AC104785.1-201ENST00000603220 588 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 MIR3653-201ENST00000625572 110 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 AC092162.3-201ENST00000624511 1624 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 VPS35P1-201ENST00000563400 1518 ntBASIC4.81□□□□□ -1.64
CTDNEP1O95476 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDNEP1O95476 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.81□□□□□ -1.64
CTDNEP1O95476 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 RNU6-673P-201ENST00000365084 104 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 RNA5SP306-201ENST00000411087 107 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC004690.1-201ENST00000418216 328 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC009480.2-201ENST00000422916 432 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 ELOCP18-201ENST00000434209 337 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 RNU7-143P-201ENST00000516781 65 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC034205.1-201ENST00000520621 638 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 C1GALT1P3-201ENST00000522049 819 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 CYCSP29-201ENST00000533731 318 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 CR383656.6-201ENST00000550518 394 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC006116.5-201ENST00000591936 559 ntBASIC4.8□□□□□ -1.64
CTDNEP1O95476 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CTDNEP1O95476 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms