Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.3□□□□□ -1.72
SEMA3DO95025 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SEMA3DO95025 CUL4AP1-201ENST00000514750 1863 ntBASIC4.3□□□□□ -1.72
SEMA3DO95025 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SEMA3DO95025 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA3DO95025 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA3DO95025 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA3DO95025 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SEMA3DO95025 RNA5SP52-201ENST00000362448 134 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 RNA5SP307-201ENST00000362863 116 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SEMA3DO95025 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SEMA3DO95025 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA3DO95025 BTG3P1-201ENST00000435859 716 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA3DO95025 AC006466.1-201ENST00000438721 289 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.29□□□□□ -1.72
SEMA3DO95025 RPL23AP93-201ENST00000440847 484 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AC012671.1-201ENST00000451912 203 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 DDX39BP2-208ENST00000453923 258 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AC090013.1-201ENST00000485147 480 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AC231760.1-201ENST00000498002 260 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA3DO95025 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA3DO95025 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA3DO95025 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.29□□□□□ -1.72
SEMA3DO95025 DEFB109D-201ENST00000529497 240 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA3DO95025 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.29□□□□□ -1.72
SEMA3DO95025 AL133243.1-201ENST00000614487 366 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 RMST_9.1-201ENST00000619945 193 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AP006248.2-201ENST00000623309 592 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 AP001784.1-201ENST00000624107 428 ntBASIC4.29□□□□□ -1.72
SEMA3DO95025 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SEMA3DO95025 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA3DO95025 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA3DO95025 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA3DO95025 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA3DO95025 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SEMA3DO95025 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA3DO95025 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC009951.1-201ENST00000623674 2614 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
SEMA3DO95025 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SEMA3DO95025 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 RNA5SP22-201ENST00000365393 109 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 RNU6-1279P-201ENST00000383917 103 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 AL078604.1-201ENST00000404609 466 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA3DO95025 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.28□□□□□ -1.72
SEMA3DO95025 RPS12P10-201ENST00000427031 377 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 CDY14P-201ENST00000431260 1014 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA3DO95025 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA3DO95025 CDY12P-201ENST00000440679 1015 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 CDY13P-201ENST00000445813 1015 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 CDY23P-201ENST00000451661 1014 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA3DO95025 ADAM3B-201ENST00000569937 840 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC006065.6-201ENST00000625201 545 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 LINC01808-202ENST00000641680 1116 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 AC009229.4-201ENST00000623854 1947 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA3DO95025 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA3DO95025 DHX40P1-201ENST00000588725 1412 ntBASIC4.28□□□□□ -1.72
SEMA3DO95025 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SEMA3DO95025 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SEMA3DO95025 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA3DO95025 AC134882.1-201ENST00000603738 1676 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 OR4K15-201ENST00000305051 1216 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 RNVU1-6-201ENST00000364688 164 ntBASIC4.27□□□□□ -1.73
SEMA3DO95025 MIR659-201ENST00000384963 97 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms