Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 RNVU1-6-201ENST00000364688 164 ntBASIC4.48□□□□□ -1.69
PRKNO60260 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PRKNO60260 RNU1-82P-201ENST00000390851 165 ntBASIC4.48□□□□□ -1.69
PRKNO60260 ZNF602P-201ENST00000405929 924 ntBASIC4.48□□□□□ -1.69
PRKNO60260 RN7SKP100-201ENST00000411258 284 ntBASIC4.48□□□□□ -1.69
PRKNO60260 UBE2V1P11-201ENST00000411559 285 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC010385.1-201ENST00000412374 256 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 USP9YP9-201ENST00000429406 715 ntBASIC4.48□□□□□ -1.69
PRKNO60260 MTCO1P53-201ENST00000441633 699 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 CYCSP24-201ENST00000445119 316 ntBASIC4.48□□□□□ -1.69
PRKNO60260 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 OR1H1P-201ENST00000448731 937 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 AL139824.2-201ENST00000458731 1095 ntBASIC4.48□□□□□ -1.69
PRKNO60260 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.48□□□□□ -1.69
PRKNO60260 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 AC093720.1-201ENST00000505681 714 ntBASIC4.48□□□□□ -1.69
PRKNO60260 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 RN7SKP265-201ENST00000516448 223 ntBASIC4.48□□□□□ -1.69
PRKNO60260 SNORA31.13-201ENST00000516624 135 ntBASIC4.48□□□□□ -1.69
PRKNO60260 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.48□□□□□ -1.69
PRKNO60260 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.48□□□□□ -1.69
PRKNO60260 AP003717.3-201ENST00000544832 1180 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.48□□□□□ -1.69
PRKNO60260 AC133555.2-201ENST00000550213 292 ntBASIC4.48□□□□□ -1.69
PRKNO60260 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 AC087477.6-201ENST00000559595 843 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 SNORD39.2-201ENST00000579995 76 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC022726.1-201ENST00000587475 207 ntBASIC4.48□□□□□ -1.69
PRKNO60260 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 RPP40P2-201ENST00000603596 712 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AL391358.1-201ENST00000605342 190 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.48□□□□□ -1.69
PRKNO60260 AC093673.2-201ENST00000609674 331 ntBASIC4.48□□□□□ -1.69
PRKNO60260 FAM27B-201ENST00000610601 213 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 MIR7703-201ENST00000620784 77 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AC006840.1-201ENST00000623069 542 ntBASIC4.48□□□□□ -1.69
PRKNO60260 AP000648.2-201ENST00000624182 404 ntBASIC4.48□□□□□ -1.69
PRKNO60260 CR381572.2-201ENST00000624852 397 ntBASIC4.48□□□□□ -1.69
PRKNO60260 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRKNO60260 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PRKNO60260 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.48□□□□□ -1.69
PRKNO60260 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
PRKNO60260 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PRKNO60260 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PRKNO60260 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRKNO60260 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PRKNO60260 CYB5AP4-201ENST00000396692 399 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AL603865.2-201ENST00000401679 213 ntBASIC4.47□□□□□ -1.69
PRKNO60260 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.47□□□□□ -1.69
PRKNO60260 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.47□□□□□ -1.69
PRKNO60260 OR51A6P-201ENST00000418680 1004 ntBASIC4.47□□□□□ -1.69
PRKNO60260 RGS17P1-201ENST00000423358 553 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.47□□□□□ -1.69
PRKNO60260 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.47□□□□□ -1.69
PRKNO60260 HSPE1P16-201ENST00000426640 348 ntBASIC4.47□□□□□ -1.69
PRKNO60260 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.47□□□□□ -1.69
PRKNO60260 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.47□□□□□ -1.69
PRKNO60260 RPL35AP21-201ENST00000437667 333 ntBASIC4.47□□□□□ -1.69
PRKNO60260 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.47□□□□□ -1.69
PRKNO60260 AL096803.2-201ENST00000450032 677 ntBASIC4.47□□□□□ -1.69
PRKNO60260 AC008280.2-201ENST00000455473 307 ntBASIC4.47□□□□□ -1.69
PRKNO60260 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.47□□□□□ -1.69
PRKNO60260 RPS20P4-201ENST00000461659 355 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms