Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.6□□□□□ -1.83
SDCBPO00560 AC093765.1-201ENST00000603758 881 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC015922.4-201ENST00000612568 690 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC103858.2-201ENST00000621471 543 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 AC008785.1-201ENST00000624475 456 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SDCBPO00560 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 RAD17P1-201ENST00000418130 2042 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.59□□□□□ -1.83
SDCBPO00560 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SDCBPO00560 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.59□□□□□ -1.83
SDCBPO00560 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 AC093909.5-201ENST00000621839 1799 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 AC010132.2-201ENST00000295493 1043 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AC079741.1-201ENST00000321498 212 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 RNU1-130P-201ENST00000363930 160 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 RPS3AP23-201ENST00000401762 784 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AP000357.1-201ENST00000409926 1165 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.59□□□□□ -1.83
SDCBPO00560 AC119751.6-201ENST00000416712 186 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 EIF1P3-201ENST00000423841 334 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.59□□□□□ -1.83
SDCBPO00560 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.59□□□□□ -1.83
SDCBPO00560 CEACAMP1-201ENST00000434624 1035 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.59□□□□□ -1.83
SDCBPO00560 RPL23AP89-201ENST00000439324 255 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 MTND6P18-201ENST00000439477 513 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.59□□□□□ -1.83
SDCBPO00560 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.59□□□□□ -1.83
SDCBPO00560 AL121877.1-201ENST00000453704 622 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 DHFRP3-201ENST00000455595 559 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.59□□□□□ -1.83
SDCBPO00560 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.59□□□□□ -1.83
SDCBPO00560 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.59□□□□□ -1.83
SDCBPO00560 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.59□□□□□ -1.83
SDCBPO00560 AC068790.7-201ENST00000602347 528 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AC079587.1-201ENST00000603846 277 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.59□□□□□ -1.83
SDCBPO00560 AC012409.3-201ENST00000611343 981 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 AC064801.1-201ENST00000612025 407 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 MIR6730-201ENST00000622213 67 ntBASIC3.59□□□□□ -1.83
SDCBPO00560 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SDCBPO00560 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.59□□□□□ -1.83
SDCBPO00560 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDCBPO00560 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SDCBPO00560 VPS35P1-201ENST00000563400 1518 ntBASIC3.59□□□□□ -1.84
SDCBPO00560 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SDCBPO00560 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.84
SDCBPO00560 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SDCBPO00560 MTND5P23-201ENST00000430812 1655 ntBASIC3.59□□□□□ -1.84
SDCBPO00560 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SDCBPO00560 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDCBPO00560 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SDCBPO00560 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SDCBPO00560 AC008033.1-201ENST00000216407 1162 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDCBPO00560 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 GCNT6-201ENST00000379591 934 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 TMSB10P2-201ENST00000416049 131 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC092647.1-201ENST00000420654 287 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.58□□□□□ -1.84
SDCBPO00560 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 SNRPFP2-201ENST00000440710 251 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC239798.3-201ENST00000454459 408 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 CCDC75P1-201ENST00000469247 791 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 RPS26P15-201ENST00000488067 348 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC104164.2-201ENST00000496953 495 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC111000.3-201ENST00000508057 576 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 VWA8P1-201ENST00000510889 176 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 RN7SKP92-201ENST00000517266 244 ntBASIC3.58□□□□□ -1.84
SDCBPO00560 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.58□□□□□ -1.84
SDCBPO00560 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.58□□□□□ -1.84
SDCBPO00560 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms