Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
DDX39AO00148 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX39AO00148 AC012409.3-201ENST00000611343 981 ntBASIC5.11□□□□□ -1.59
DDX39AO00148 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.11□□□□□ -1.59
DDX39AO00148 AC009032.1-201ENST00000617574 431 ntBASIC5.11□□□□□ -1.59
DDX39AO00148 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DDX39AO00148 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DDX39AO00148 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX39AO00148 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
DDX39AO00148 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DDX39AO00148 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DDX39AO00148 AC090971.4-201ENST00000560291 1800 ntBASIC5.11□□□□□ -1.59
DDX39AO00148 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX39AO00148 AC093535.2-201ENST00000624769 2326 ntBASIC5.11□□□□□ -1.59
DDX39AO00148 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
DDX39AO00148 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
DDX39AO00148 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 ELOCP19-201ENST00000411919 318 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 SETP15-201ENST00000412724 337 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 RPL21P108-201ENST00000413857 481 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 TMSB10P2-201ENST00000416049 131 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.1□□□□□ -1.59
DDX39AO00148 RPL21P43-201ENST00000425440 472 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AL451142.2-201ENST00000429076 2090 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.1□□□□□ -1.59
DDX39AO00148 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.1□□□□□ -1.59
DDX39AO00148 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.1□□□□□ -1.59
DDX39AO00148 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.1□□□□□ -1.59
DDX39AO00148 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.1□□□□□ -1.59
DDX39AO00148 RNU6-347P-201ENST00000516658 105 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AC008083.2-201ENST00000546707 476 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.1□□□□□ -1.59
DDX39AO00148 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 AL133247.2-201ENST00000603236 482 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AL049844.2-201ENST00000604280 628 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AC115286.1-201ENST00000604298 434 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AC010200.2-201ENST00000605098 235 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 AL445423.1-201ENST00000609941 536 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 uc_338.9-201ENST00000617424 182 ntBASIC5.1□□□□□ -1.59
DDX39AO00148 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX39AO00148 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
DDX39AO00148 THAP12P5-201ENST00000405864 2275 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DDX39AO00148 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DDX39AO00148 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 AC011155.1-201ENST00000316512 456 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DDX39AO00148 RNU6-244P-201ENST00000391028 104 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 AL589655.1-201ENST00000405398 482 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX39AO00148 DPY19L1P2-201ENST00000426647 915 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 HMGN2P27-201ENST00000427352 270 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX39AO00148 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX39AO00148 Z95152.1-201ENST00000453556 656 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 NPM1P29-201ENST00000483112 803 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 AC026979.1-201ENST00000492525 396 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 AC005912.1-201ENST00000495392 255 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 AC025674.1-201ENST00000507074 324 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX39AO00148 NPM1P47-201ENST00000560843 856 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 MIR4284-201ENST00000578924 81 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 MIR6798-201ENST00000612887 67 ntBASIC5.09□□□□□ -1.59
DDX39AO00148 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX39AO00148 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX39AO00148 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX39AO00148 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
DDX39AO00148 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.09□□□□□ -1.6
DDX39AO00148 AC000374.1-201ENST00000434698 1745 ntBASIC5.09□□□□□ -1.6
DDX39AO00148 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.08□□□□□ -1.6
DDX39AO00148 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms