Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 OR5AZ1P-201ENST00000527448 943 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 CR383656.6-201ENST00000550518 394 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 MIR7853-201ENST00000584820 132 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RN7SL622P-201ENST00000585292 275 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC019131.2-201ENST00000609071 870 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AP002782.1-201ENST00000623107 614 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AP003400.3-201ENST00000624904 346 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC079097.1-201ENST00000512187 1399 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 U3.3-201ENST00000362986 216 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 ATP5F1P2-201ENST00000398143 760 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL034403.1-201ENST00000399414 885 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL133482.1-201ENST00000415988 498 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 MTND4P3-201ENST00000417829 541 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 RPA2P2-201ENST00000419698 796 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC093084.1-201ENST00000424233 687 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 ETF1P3-201ENST00000430422 1160 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL035458.1-201ENST00000433096 585 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC084290.1-201ENST00000434995 374 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 RPS29P10-201ENST00000439197 166 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 KNOP1P3-201ENST00000446933 426 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 VN1R40P-201ENST00000455196 941 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 GTF2IP12-201ENST00000456547 356 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 RN7SL591P-201ENST00000496150 292 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC025459.1-201ENST00000504072 156 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 SNORA31.13-201ENST00000516624 135 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC135279.1-201ENST00000543493 504 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL049870.4-201ENST00000555741 486 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 MTND4P33-201ENST00000556706 766 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC012254.4-201ENST00000588843 273 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC079610.2-201ENST00000604818 690 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL139124.1-201ENST00000609123 421 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AL159169.2-201ENST00000610061 1269 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC078883.4-201ENST00000623218 367 ntBASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX2IPQ9Y2D8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SSX2IPQ9Y2D8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
SSX2IPQ9Y2D8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms