Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK2Q9UPX8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AC233968.1-201ENST00000611212 1300 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 NCOA4P2-201ENST00000340589 1813 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AL078604.1-201ENST00000404609 466 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 MIR1179-201ENST00000408703 91 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 VDAC1P9-201ENST00000412766 841 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AP000619.3-201ENST00000535634 1127 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AC008966.2-201ENST00000606157 453 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 AC012314.7-201ENST00000619693 93 ntBASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK2Q9UPX8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 MIR1911-201ENST00000410783 80 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 RPL23AP46-201ENST00000438548 490 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AL157884.3-201ENST00000448273 1184 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 RPL7P15-201ENST00000461190 712 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AL591473.1-201ENST00000464297 313 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC108145.1-201ENST00000503770 153 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC027455.1-201ENST00000574104 594 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 SRGNP1-201ENST00000603392 451 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC002069.2-201ENST00000603580 883 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC112230.1-201ENST00000604342 547 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 AC010608.2-201ENST00000624830 470 ntBASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK2Q9UPX8 HSPD1P14-201ENST00000432666 1618 ntBASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 PEX12P1-201ENST00000400284 1048 ntBASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 AC110768.1-201ENST00000509222 400 ntBASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 AC140113.4-201ENST00000622087 222 ntBASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 VPS35P1-201ENST00000563400 1518 ntBASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHANK2Q9UPX8 SNORA73.2-201ENST00000364946 201 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 KRR1P1-201ENST00000419430 803 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AC092647.1-201ENST00000420654 287 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 EIF1P3-201ENST00000423841 334 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AC010460.1-201ENST00000507087 466 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 NPM1P21-201ENST00000513394 762 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AC124068.1-201ENST00000563131 678 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AL357559.1-201ENST00000622228 274 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AP001157.1-201ENST00000550837 2339 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AC006971.1-201ENST00000407916 4486 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 AL138820.1-201ENST00000617901 5305 ntBASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHANK2Q9UPX8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AP000357.1-201ENST00000409926 1165 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms