Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC018442.3-201ENST00000523025 183 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AL121834.1-201ENST00000572284 509 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC008507.1-201ENST00000587506 734 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC128687.1-201ENST00000605304 619 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC073968.1-201ENST00000618594 637 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 AC135068.5-201ENST00000624197 983 ntBASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PPARGC1AQ9UBK2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 Z99496.1-201ENST00000469424 1477 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 Y_RNA.3-201ENST00000362331 103 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 U3.4-201ENST00000363352 213 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 RN7SKP78-201ENST00000364711 318 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 RN7SKP15-201ENST00000364742 309 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 RNU6-1119P-201ENST00000384349 108 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 Y_RNA.517-201ENST00000384551 106 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 TMSB4XP8-201ENST00000402089 135 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 FCF1P9-201ENST00000412546 282 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 CDK8P2-201ENST00000415020 547 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 TMSB4XP6-201ENST00000415187 135 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 TMSB4XP1-201ENST00000424567 135 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 RPL21P110-201ENST00000433345 446 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 MTND1P4-201ENST00000435196 415 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AL034418.1-201ENST00000448675 860 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 OR52E3P-201ENST00000452083 936 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC004129.2-201ENST00000457229 287 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC116337.2-201ENST00000477662 156 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 NCOR1P1-202ENST00000486162 291 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC010460.1-201ENST00000507087 466 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC074255.1-201ENST00000511259 501 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC087683.1-201ENST00000591187 441 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC005962.2-201ENST00000611427 652 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 U6atac.1-201ENST00000616025 117 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 MIR7844-201ENST00000616161 122 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC087565.3-203ENST00000641018 837 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 VPS35P1-201ENST00000563400 1518 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC109315.1-201ENST00000584143 1347 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 AC093311.1-201ENST00000506586 2021 ntBASIC5.98□□□□□ -1.45
PPARGC1AQ9UBK2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PPARGC1AQ9UBK2 Y_RNA.18-201ENST00000362461 102 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms