Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AL512506.1-201ENST00000613918 449 ntBASIC4.74□□□□□ -1.65
HACD3Q9P035 AC015804.1-201ENST00000622935 435 ntBASIC4.74□□□□□ -1.65
HACD3Q9P035 AP003400.6-201ENST00000624698 740 ntBASIC4.74□□□□□ -1.65
HACD3Q9P035 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.74□□□□□ -1.65
HACD3Q9P035 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.74□□□□□ -1.65
HACD3Q9P035 AC006971.1-201ENST00000407916 4486 ntBASIC4.74□□□□□ -1.65
HACD3Q9P035 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HACD3Q9P035 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.74□□□□□ -1.65
HACD3Q9P035 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HACD3Q9P035 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HACD3Q9P035 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HACD3Q9P035 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AC132825.1-201ENST00000463573 2247 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AL031119.1-201ENST00000404707 1879 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HACD3Q9P035 RNU1-108P-201ENST00000362556 161 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 RNA5SP191-201ENST00000362585 102 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 RN7SKP115-201ENST00000363177 317 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 MIR195-201ENST00000385194 87 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 Z98745.1-201ENST00000402553 494 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AC073136.2-201ENST00000417282 849 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.73□□□□□ -1.65
HACD3Q9P035 MTND4P24-201ENST00000424002 397 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC008072.1-201ENST00000434254 824 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC005154.2-201ENST00000438110 379 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 AC008410.1-201ENST00000483777 339 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC025768.1-201ENST00000510057 267 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.73□□□□□ -1.65
HACD3Q9P035 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AL110118.1-201ENST00000553543 400 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.73□□□□□ -1.65
HACD3Q9P035 SULT1C2P2-201ENST00000562517 294 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.73□□□□□ -1.65
HACD3Q9P035 MIR4436B2-201ENST00000581415 91 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 MIR4436B1-201ENST00000583272 91 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AC073137.1-201ENST00000605636 634 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC023813.4-201ENST00000607580 580 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC135803.1-201ENST00000608748 565 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AL158196.1-201ENST00000616786 434 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 AC105105.5-201ENST00000622635 1294 ntBASIC4.73□□□□□ -1.65
HACD3Q9P035 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
HACD3Q9P035 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HACD3Q9P035 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.73□□□□□ -1.65
HACD3Q9P035 AC108751.5-201ENST00000492880 1336 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.72□□□□□ -1.65
HACD3Q9P035 AC017002.4-201ENST00000604721 1525 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HACD3Q9P035 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HACD3Q9P035 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HACD3Q9P035 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HACD3Q9P035 OR10J6P-201ENST00000289731 930 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.72□□□□□ -1.65
HACD3Q9P035 RNU1-20P-201ENST00000363314 162 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 SNORA58B-201ENST00000364259 136 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.72□□□□□ -1.65
HACD3Q9P035 OR6K3-202ENST00000368146 996 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AL356057.1-202ENST00000402263 756 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AL080315.1-201ENST00000406055 466 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HACD3Q9P035 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.72□□□□□ -1.65
HACD3Q9P035 MTCYBP7-201ENST00000419540 1134 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AC004074.1-201ENST00000421810 1063 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.72□□□□□ -1.65
HACD3Q9P035 MTND2P21-201ENST00000436242 1042 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AP000949.1-201ENST00000438328 629 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AL627224.1-201ENST00000448334 444 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HACD3Q9P035 RPL7AP28-201ENST00000464513 571 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 RPL23AP37-201ENST00000479658 549 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AC011005.3-201ENST00000491624 395 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AC021087.2-201ENST00000504656 1203 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 MTND3P24-201ENST00000506306 329 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.72□□□□□ -1.65
HACD3Q9P035 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.72□□□□□ -1.65
HACD3Q9P035 MTND1P36-201ENST00000522384 936 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.72□□□□□ -1.65
HACD3Q9P035 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.72□□□□□ -1.65
HACD3Q9P035 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.72□□□□□ -1.65
HACD3Q9P035 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.72□□□□□ -1.65
HACD3Q9P035 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.72□□□□□ -1.65
HACD3Q9P035 AL136520.1-202ENST00000555494 763 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 RN7SL652P-201ENST00000577769 300 ntBASIC4.72□□□□□ -1.65
HACD3Q9P035 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.72□□□□□ -1.65
HACD3Q9P035 HMGB2P1-201ENST00000591146 634 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms