Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AC007225.2-201ENST00000562529 256 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 CYP4A43P-201ENST00000568156 121 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 MIR3691-201ENST00000578066 90 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 MIR4458-201ENST00000578872 75 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 AC011445.2-201ENST00000599274 173 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 ABI1P1-201ENST00000603375 1120 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 uc_338.32-201ENST00000615087 172 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 AC105105.5-201ENST00000622635 1294 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 AP000843.1-201ENST00000624880 701 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 U3.53-201ENST00000628922 216 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 AC138627.1-204ENST00000641894 765 ntBASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTNNBIP1Q9NSA3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 ZNF137P-201ENST00000456718 1920 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 MFSD8-220ENST00000641243 1422 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 MARK2P15-201ENST00000432204 2186 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 RNA5SP52-201ENST00000362448 134 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 RNA5SP305-201ENST00000362665 119 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 RN7SKP15-201ENST00000364742 309 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 MT-TP-201ENST00000387461 68 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AL160275.2-201ENST00000412010 394 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 TRGV7-201ENST00000427089 353 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC016831.4-201ENST00000438302 307 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AL391987.1-201ENST00000441025 200 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC012671.1-201ENST00000451912 203 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 RPL23AP2-201ENST00000471227 466 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC010683.1-201ENST00000473673 378 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC105918.1-201ENST00000474399 838 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 RNA5SP154-201ENST00000516193 111 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC008033.2-201ENST00000542626 177 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC069240.1-201ENST00000548774 375 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 HAUS8P1-201ENST00000549005 542 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC087888.1-201ENST00000550884 1254 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 MIR1269B-201ENST00000580405 75 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 VN1R79P-201ENST00000593540 513 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC083899.3-201ENST00000603413 594 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC015813.4-201ENST00000610469 179 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AL645927.2-201ENST00000618350 349 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC015722.2-201ENST00000622210 551 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC145207.9-201ENST00000623802 325 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC007546.2-201ENST00000623996 360 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC095050.2-201ENST00000510748 1458 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 MFSD8-242ENST00000641690 4199 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC017002.4-201ENST00000604721 1525 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 AC105074.1-201ENST00000623380 3095 ntBASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNBIP1Q9NSA3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 U8.4-201ENST00000363626 134 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 RNU1-106P-201ENST00000384382 164 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 AL034403.1-201ENST00000399414 885 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 RPL31P52-201ENST00000407532 367 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 TRIM60P17-201ENST00000415181 719 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 RPS23P10-201ENST00000416185 486 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 CHEK2P5-201ENST00000423877 246 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 HLA-N-201ENST00000437516 135 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 RPL7P33-201ENST00000444159 742 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 TRY2P-201ENST00000448860 689 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 AC144530.1-201ENST00000452862 555 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 CALM1P2-201ENST00000452941 448 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 snoU13.20-201ENST00000459180 104 ntBASIC3.63□□□□□ -1.83
CTNNBIP1Q9NSA3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms