Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 NDUFS5P3-201ENST00000450668 321 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 RPS4XP1-201ENST00000482189 787 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC011037.1-201ENST00000483964 558 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 PPIAP19-201ENST00000486414 492 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SL214P-201ENST00000487317 265 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC108693.1-201ENST00000496068 432 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC025445.1-201ENST00000502728 300 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 HMGB1P46-201ENST00000520062 610 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AP002812.4-201ENST00000532139 286 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC011477.5-201ENST00000586571 259 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 FKBP1AP1-201ENST00000594588 318 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC115621.1-201ENST00000604653 858 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC024023.1-201ENST00000624530 922 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC090229.1-201ENST00000590983 1609 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL592182.3-201ENST00000642132 3304 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL133412.1-201ENST00000380194 2992 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL353743.4-201ENST00000422653 1547 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 SNURFL-201ENST00000309296 343 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RNA5SP52-201ENST00000362448 134 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RNU4-39P-201ENST00000362455 127 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RNA5SP22-201ENST00000365393 109 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC083799.1-201ENST00000366451 910 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL590290.1-201ENST00000405336 380 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL450992.3-201ENST00000413192 568 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL513325.1-201ENST00000417716 1034 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC004552.1-201ENST00000419089 348 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 LINC00993-201ENST00000420453 540 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RPL21P43-201ENST00000425440 472 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL163193.1-201ENST00000444895 788 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RPS27AP15-201ENST00000447672 466 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RPS26P3-201ENST00000470205 348 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 OR2AO1P-201ENST00000476497 403 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC090543.2-201ENST00000483963 348 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC004057.1-201ENST00000485827 348 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 IGLV3-26-201ENST00000520756 302 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC067805.1-201ENST00000559344 470 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 AC115085.1-201ENST00000588924 229 ntBASIC3.09□□□□□ -1.91
SND1-IT1Q9HBX3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms