Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AP003066.2-201ENST00000529375 555 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 OR5AN2P-201ENST00000534535 896 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AL132857.1-201ENST00000555180 708 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 EIF1P5-201ENST00000585002 234 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC005242.1-201ENST00000585658 438 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC234771.5-201ENST00000600161 514 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC015849.2-201ENST00000605738 409 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC087752.4-201ENST00000605911 462 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 MIR378J-201ENST00000611988 109 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC231759.1-201ENST00000616455 597 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC092140.2-201ENST00000618027 521 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.19□□□□□ -1.58
EBF3Q9H4W6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
EBF3Q9H4W6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC006210.2-201ENST00000367074 1545 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC083843.2-201ENST00000568248 6253 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 SAMMSON-226ENST00000642089 1582 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 RNA5SP505-201ENST00000364748 108 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 SNORA2.3-201ENST00000383920 135 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 RNU2-50P-201ENST00000410494 143 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC013262.1-201ENST00000426710 252 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 OR6K5P-201ENST00000447050 945 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 RAB28P3-201ENST00000448325 597 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 RPL32P14-201ENST00000463196 378 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC116562.1-201ENST00000485355 781 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AK4P6-201ENST00000505168 528 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC069306.1-201ENST00000507006 843 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC093770.1-201ENST00000511559 571 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 Y_RNA.688-201ENST00000516565 95 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC125611.1-201ENST00000549563 229 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC006349.1-201ENST00000555526 235 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC091042.1-201ENST00000579213 173 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC090425.2-201ENST00000608818 501 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC009090.3-201ENST00000616553 565 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC011330.2-201ENST00000621680 635 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC105105.5-201ENST00000622635 1294 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC015871.5-202ENST00000623252 701 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 HSPD1P14-201ENST00000432666 1618 ntBASIC5.18□□□□□ -1.58
EBF3Q9H4W6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.18□□□□□ -1.58
EBF3Q9H4W6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
EBF3Q9H4W6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms