Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL445363.3-201ENST00000623080 671 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 MAPK10-286ENST00000641208 8747 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 SYT14P1-202ENST00000600441 1448 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 CUL4AP1-201ENST00000514750 1863 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 SNORA70C-201ENST00000384538 135 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AL161909.1-201ENST00000397390 712 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC062016.2-201ENST00000420950 676 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 GTF2IP2-201ENST00000424290 697 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 RPL35AP15-201ENST00000468042 339 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 RPL7P19-201ENST00000469948 618 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 PARP4P3-201ENST00000510265 317 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC008958.1-201ENST00000511047 682 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 MTCO1P35-201ENST00000515270 228 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC025884.1-201ENST00000556034 378 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 HMGB2P1-201ENST00000591146 634 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AL137072.1-201ENST00000603444 466 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 QTRT1P1-201ENST00000604344 1078 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC010857.1-201ENST00000606398 594 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 Z98200.1-201ENST00000607298 470 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC022960.2-201ENST00000616300 666 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AL023881.1-201ENST00000621088 301 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC005261.4-201ENST00000600047 1385 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 AC021242.1-201ENST00000507315 2035 ntBASIC4.73□□□□□ -1.65
NXF3Q9H4D5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NXF3Q9H4D5 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 HSPD1P14-201ENST00000432666 1618 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RN7SKP227-201ENST00000364445 330 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RNA5SP515-201ENST00000364570 118 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 BMS1P3-201ENST00000372011 932 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RNU6-167P-201ENST00000384292 106 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RPL23AP25-201ENST00000430973 463 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC107015.1-201ENST00000466902 747 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RPL35P6-201ENST00000490024 372 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RN7SL812P-201ENST00000493791 279 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RNA5SP49-201ENST00000516450 115 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC234775.3-201ENST00000564612 656 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 RNF138P2-201ENST00000603490 592 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC092653.1-201ENST00000608509 531 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AL021997.2-201ENST00000615674 271 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC007546.1-201ENST00000619452 559 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC007546.2-201ENST00000623996 360 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 FP325313.1-201ENST00000638228 703 ntBASIC4.72□□□□□ -1.65
NXF3Q9H4D5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NXF3Q9H4D5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
NXF3Q9H4D5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
NXF3Q9H4D5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NXF3Q9H4D5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NXF3Q9H4D5 RLIMP2-201ENST00000427891 1563 ntBASIC4.71□□□□□ -1.66
NXF3Q9H4D5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NXF3Q9H4D5 LARP1BP1-201ENST00000506036 1359 ntBASIC4.71□□□□□ -1.66
NXF3Q9H4D5 RNA5SP28-201ENST00000363841 119 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms