Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC023509.5-201ENST00000617434 807 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 AC016542.2-201ENST00000624201 619 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 AP002967.1-201ENST00000624203 539 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 OR11H5P-202ENST00000641612 1325 ntBASIC4.65□□□□□ -1.67
TRIM4Q9C037 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM4Q9C037 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM4Q9C037 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC016588.2-201ENST00000632484 3021 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 SNORD74.4-201ENST00000364129 80 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 RNU1-64P-201ENST00000365443 163 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 RNA5SP39-201ENST00000411245 120 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 RPS27AP7-201ENST00000422792 455 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 OR7E125P-201ENST00000443450 846 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC010326.1-201ENST00000462726 602 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC109327.1-201ENST00000471666 403 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC011005.3-201ENST00000491624 395 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 MRPS33P2-201ENST00000507850 322 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC093840.1-201ENST00000511599 336 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC018797.3-201ENST00000513388 1241 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 BUD31P1-201ENST00000521828 359 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AP001880.2-201ENST00000538233 448 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC034105.4-201ENST00000568304 277 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AC005377.1-201ENST00000605126 456 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 AL022401.1-201ENST00000619498 108 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
TRIM4Q9C037 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 DDX18P5-201ENST00000534547 1306 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 AL356489.2-201ENST00000566968 3528 ntBASIC4.64□□□□□ -1.67
TRIM4Q9C037 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM4Q9C037 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM4Q9C037 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AL031985.3-201ENST00000565390 2449 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AP001002.1-201ENST00000625148 1513 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 VDAC1P9-201ENST00000412766 841 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AL591848.1-201ENST00000413092 322 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC013410.1-201ENST00000436223 1232 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 RPL7P33-201ENST00000444159 742 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 snoU13.22-201ENST00000459428 104 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC010618.1-201ENST00000469924 477 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC105918.1-201ENST00000474399 838 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC146944.2-203ENST00000502493 354 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 PPBPP1-201ENST00000510807 373 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC139495.1-202ENST00000513164 354 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 MORF4L1P3-201ENST00000525966 950 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 EIF1P5-201ENST00000585002 234 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM4Q9C037 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM4Q9C037 AL049794.2-201ENST00000616301 365 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 ASNSP1-201ENST00000518311 1939 ntBASIC4.63□□□□□ -1.67
TRIM4Q9C037 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM4Q9C037 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRIM4Q9C037 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM4Q9C037 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms