Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MRPS33P3-201ENST00000513456 322 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC015720.2-201ENST00000567709 334 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 RN7SL290P-201ENST00000578661 300 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL109653.1-201ENST00000603091 248 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 NTAN1P1-201ENST00000603150 646 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC005252.1-201ENST00000604518 1063 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL360219.1-201ENST00000610230 366 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 VIS1.1-201ENST00000610517 203 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 MIR6861-201ENST00000618657 64 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC005840.5-201ENST00000619166 599 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AL691477.1-201ENST00000624398 162 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 OR8B1P-202ENST00000641132 1178 ntBASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM54Q9BYV2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM54Q9BYV2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
TRIM54Q9BYV2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
TRIM54Q9BYV2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.34□□□□□ -1.56
TRIM54Q9BYV2 AC019072.1-201ENST00000604535 1551 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 Y_RNA.192-201ENST00000363977 102 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 SNORA48.4-201ENST00000391089 134 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 TAF9BP1-201ENST00000396646 746 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 GSTA8P-201ENST00000404253 637 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 MIR1282-201ENST00000408865 101 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 GNG5P5-201ENST00000420444 220 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 MTND6P12-201ENST00000428247 522 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 USP9YP31-201ENST00000431405 881 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL672138.1-201ENST00000450604 1015 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL133217.1-201ENST00000450980 425 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 RN7SL51P-201ENST00000468230 285 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 VPS26AP1-201ENST00000483197 979 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC022133.1-201ENST00000490961 571 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 EIF3LP3-201ENST00000495197 822 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC082651.2-201ENST00000496833 166 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC008521.2-201ENST00000591021 259 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC009237.13-201ENST00000603193 276 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC080013.3-201ENST00000606839 578 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL021707.7-201ENST00000607991 416 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC109583.2-201ENST00000617367 129 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC127024.6-201ENST00000621598 424 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 CDRT1-208ENST00000630868 794 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AL355852.1-201ENST00000454081 1771 ntBASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM54Q9BYV2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms