Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.37□□□□□ -1.55
RPAP1Q9BWH6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPAP1Q9BWH6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RPAP1Q9BWH6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.37□□□□□ -1.55
RPAP1Q9BWH6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RPAP1Q9BWH6 AL592182.3-201ENST00000642132 3304 ntBASIC5.37□□□□□ -1.55
RPAP1Q9BWH6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 RNU1-13P-201ENST00000384499 162 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 RPS12P10-201ENST00000427031 377 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 PHBP16-201ENST00000446318 950 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AC012671.1-201ENST00000451912 203 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 DHFRP3-201ENST00000455595 559 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AC041039.1-201ENST00000485656 536 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 RPS27AP16-201ENST00000492222 470 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 CYCSP29-201ENST00000533731 318 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 AC020634.1-201ENST00000608701 549 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.36□□□□□ -1.55
RPAP1Q9BWH6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 MAPK10-320ENST00000641462 6696 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC104118.1-201ENST00000607625 1589 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC000123.3-201ENST00000624029 4975 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AP000542.2-201ENST00000623199 6179 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC083843.2-201ENST00000568248 6253 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC008033.1-201ENST00000216407 1162 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 RPS26P8-201ENST00000393490 348 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 PDSS1P1-201ENST00000422953 1114 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 NUTF2P3-201ENST00000448540 384 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 RPS6P2-201ENST00000454208 705 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 MIR2116-201ENST00000517221 80 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC022882.1-201ENST00000532142 501 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 TRAV8-5-201ENST00000537369 341 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 ARF4P1-201ENST00000605447 541 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AL161637.1-201ENST00000622380 412 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 MIR3653-201ENST00000625572 110 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 ASNSP1-204ENST00000641977 1664 ntBASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPAP1Q9BWH6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 SNORA37-201ENST00000384504 129 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 MIR134-201ENST00000385258 73 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AL139039.2-201ENST00000407436 479 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 RN7SKP247-201ENST00000411094 308 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 NFYAP1-201ENST00000431953 972 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 RPEP2-201ENST00000432149 701 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC114495.1-201ENST00000441274 436 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 RPS27AP15-201ENST00000447672 466 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 VN1R32P-201ENST00000452234 905 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC108022.1-201ENST00000493466 478 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 EIF4EP5-201ENST00000528228 640 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 GLRXP2-201ENST00000555594 321 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC025884.1-201ENST00000556034 378 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 RPL23AP97-201ENST00000568955 471 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 IPO5P1-202ENST00000600039 287 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC233280.2-201ENST00000603917 1070 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC113403.1-201ENST00000604910 193 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AL591034.3-201ENST00000605511 685 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms