Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPS4XP15-201ENST00000489210 795 ntBASIC6.99□□□□□ -1.29
IFT140Q96RY7 AC074250.1-201ENST00000511117 192 ntBASIC6.99□□□□□ -1.29
IFT140Q96RY7 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 AC023632.6-201ENST00000624338 2177 ntBASIC6.99□□□□□ -1.29
IFT140Q96RY7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
IFT140Q96RY7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
IFT140Q96RY7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
IFT140Q96RY7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
IFT140Q96RY7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
IFT140Q96RY7 AP000641.1-201ENST00000531988 1639 ntBASIC6.99□□□□□ -1.29
IFT140Q96RY7 RNA5SP22-201ENST00000365393 109 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 RPL21P17-201ENST00000397467 475 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 EIF1P3-201ENST00000423841 334 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 RPS26P28-201ENST00000470806 348 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
IFT140Q96RY7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 AL352979.3-201ENST00000553515 247 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 AC005034.4-201ENST00000603612 899 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 AL138721.1-201ENST00000616756 179 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 AC015914.2-201ENST00000618167 288 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 TTC41P-205ENST00000551270 3963 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
IFT140Q96RY7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
IFT140Q96RY7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 OR9M1P-201ENST00000459641 921 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 RPL7P9-201ENST00000468715 747 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 Z98200.1-201ENST00000607298 470 ntBASIC6.98□□□□□ -1.29
IFT140Q96RY7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.98□□□□□ -1.29
IFT140Q96RY7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 CYCSP32-201ENST00000440548 321 ntBASIC6.97□□□□□ -1.29
IFT140Q96RY7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 HPRT1P2-201ENST00000505250 544 ntBASIC6.97□□□□□ -1.29
IFT140Q96RY7 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 AC106782.4-201ENST00000568264 210 ntBASIC6.97□□□□□ -1.29
IFT140Q96RY7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 AL160290.3-201ENST00000604869 165 ntBASIC6.97□□□□□ -1.29
IFT140Q96RY7 AP001002.2-201ENST00000625137 386 ntBASIC6.97□□□□□ -1.29
IFT140Q96RY7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
IFT140Q96RY7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
IFT140Q96RY7 MTND5P1-201ENST00000445440 1375 ntBASIC6.97□□□□□ -1.29
IFT140Q96RY7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.96□□□□□ -1.29
IFT140Q96RY7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.96□□□□□ -1.29
IFT140Q96RY7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
IFT140Q96RY7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.96□□□□□ -1.29
IFT140Q96RY7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
IFT140Q96RY7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
IFT140Q96RY7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
IFT140Q96RY7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 OR56B2P-201ENST00000317102 954 ntBASIC6.96□□□□□ -1.3
IFT140Q96RY7 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 AL358832.1-201ENST00000497800 389 ntBASIC6.96□□□□□ -1.3
IFT140Q96RY7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 RNA5SP446-201ENST00000515955 82 ntBASIC6.96□□□□□ -1.3
IFT140Q96RY7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 AC006064.5-201ENST00000541782 248 ntBASIC6.96□□□□□ -1.3
IFT140Q96RY7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 AC027807.1-201ENST00000559921 996 ntBASIC6.96□□□□□ -1.3
IFT140Q96RY7 AC005000.2-201ENST00000605468 310 ntBASIC6.96□□□□□ -1.3
IFT140Q96RY7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
IFT140Q96RY7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.96□□□□□ -1.3
IFT140Q96RY7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
IFT140Q96RY7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.95□□□□□ -1.3
IFT140Q96RY7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.95□□□□□ -1.3
IFT140Q96RY7 AC007066.1-201ENST00000392902 381 ntBASIC6.95□□□□□ -1.3
IFT140Q96RY7 BOLA3P4-201ENST00000418151 400 ntBASIC6.95□□□□□ -1.3
IFT140Q96RY7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.95□□□□□ -1.3
IFT140Q96RY7 WBP1LP4-201ENST00000505043 344 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms