Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRIM60P17-201ENST00000415181 719 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 RPS4XP10-201ENST00000465034 731 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC015914.2-201ENST00000618167 288 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC011755.1-201ENST00000623763 2049 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 EIF3EP2-201ENST00000423042 1814 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 DDX18P5-201ENST00000534547 1306 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC000374.1-201ENST00000434698 1745 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 SNORD3H-201ENST00000384486 214 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AL139247.1-201ENST00000422768 325 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 APOOP2-201ENST00000461561 539 ntBASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.5□□□□□ -1.85
CSMD1Q96PZ7 AC021242.1-201ENST00000507315 2035 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 MAPK10-371ENST00000641952 5209 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ANKRD36P1-201ENST00000344424 659 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC093719.1-202ENST00000392735 373 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC112206.1-201ENST00000468416 477 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC027216.1-201ENST00000577726 685 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 OR8G7P-201ENST00000616658 848 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 MAPK10-303ENST00000641324 3959 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 RNU2-65P-201ENST00000410162 185 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 RN7SKP182-201ENST00000410772 298 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 RPL21P91-201ENST00000429231 479 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC092162.1-201ENST00000432828 434 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 RPL35AP15-201ENST00000468042 339 ntBASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CSMD1Q96PZ7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 RPL7P58-201ENST00000402913 758 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AL590609.2-201ENST00000421430 368 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 RPS4XP12-201ENST00000461747 709 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 U3.45-201ENST00000607547 219 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AL645927.2-201ENST00000618350 349 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 DDX18P6-201ENST00000450119 1997 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC023632.6-201ENST00000624338 2177 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 RPS4XP4-201ENST00000443195 763 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 MTND1P6-201ENST00000523621 946 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 MIR4433B-201ENST00000581329 102 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC104260.2-201ENST00000623551 3497 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 MTCO1P46-201ENST00000451639 1491 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC068254.2-201ENST00000623938 3577 ntBASIC3.48□□□□□ -1.85
CSMD1Q96PZ7 AC074029.4-201ENST00000624796 1859 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms