Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 METTL21EP-201ENST00000298105 713 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RN7SKP104-201ENST00000362605 328 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RNA5SP123-201ENST00000363244 119 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 XKRYP4-201ENST00000414395 483 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RPS27P18-201ENST00000431701 247 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 FTH1P16-201ENST00000435241 552 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 NPM1P33-201ENST00000438918 872 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 MTCO3P43-201ENST00000440974 771 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 TDGF1P1-201ENST00000445734 527 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 XKRYP5-201ENST00000449659 483 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 HMGB3P21-201ENST00000452483 547 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC026348.1-201ENST00000462549 1053 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC108751.2-201ENST00000469993 231 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC104971.1-201ENST00000495117 578 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 IGKV2-36-201ENST00000519999 223 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC025260.1-201ENST00000548858 430 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC079075.1-201ENST00000559543 878 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC106785.3-201ENST00000564064 847 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC115085.1-201ENST00000588924 229 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC133552.5-201ENST00000604266 540 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC004775.1-201ENST00000607389 753 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 MIR1264-201ENST00000616374 69 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC016769.4-201ENST00000616893 535 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AC024341.1-201ENST00000526444 1552 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 AL031119.1-201ENST00000404707 1879 ntBASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AL353743.4-201ENST00000422653 1547 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 MTND4P21-201ENST00000453886 1357 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 OR56B2P-201ENST00000317102 954 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 OR51B3P-201ENST00000412287 913 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AL138785.1-201ENST00000425821 331 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 EIF2S2P3-201ENST00000428356 999 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 RPL7AP6-201ENST00000477943 801 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC023050.1-201ENST00000498198 304 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 SCARNA22-201ENST00000503991 125 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC093014.1-201ENST00000548926 724 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC025918.2-201ENST00000558683 763 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM5Q96HC4 AC109780.1-201ENST00000451768 1344 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms