Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC023824.3-201ENST00000569003 562 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC022884.2-201ENST00000578535 580 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC011626.1-201ENST00000604710 562 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC018695.5-201ENST00000605872 315 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC087683.2-201ENST00000611384 326 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AL121612.2-201ENST00000612261 482 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 SOCS5P3-201ENST00000425115 1576 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC021242.1-201ENST00000507315 2035 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AP000542.2-201ENST00000623199 6179 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 SMG1P4-204ENST00000523028 4131 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 SAMMSON-213ENST00000641336 1521 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RNU6-906P-201ENST00000384700 70 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 MIR765-201ENST00000390226 114 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RNA5SP296-201ENST00000410523 111 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC211486.3-201ENST00000412694 621 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RPL23AP27-201ENST00000415161 451 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 TAF13P2-201ENST00000416876 286 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC244505.3-201ENST00000454598 187 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 SNORD11.1-201ENST00000459482 85 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC090114.3-201ENST00000479267 829 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RPL23AP37-201ENST00000479658 549 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 PRELID3BP4-201ENST00000515476 571 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RN7SKP66-201ENST00000516681 231 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 Y_RNA.717-201ENST00000517106 92 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC012400.1-201ENST00000518452 381 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 EEF1A1P37-201ENST00000522748 715 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC100784.1-201ENST00000522790 310 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC087763.1-201ENST00000603391 286 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC098935.2-201ENST00000604222 466 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC024060.1-201ENST00000607052 494 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC009974.1-201ENST00000608881 455 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 MIR7973-1-201ENST00000614683 76 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 MIR7155-201ENST00000615925 56 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 uc_338.9-201ENST00000617424 182 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 AC135068.12-201ENST00000637370 931 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CHMP4CQ96CF2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 AC099786.3-201ENST00000565735 1410 ntBASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.16□□□□□ -1.42
CHMP4CQ96CF2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms