Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL022311.1-201ENST00000623726 19416 ntBASIC5.77□□□□□ -1.49
HPS3Q969F9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.76□□□□□ -1.49
HPS3Q969F9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.76□□□□□ -1.49
HPS3Q969F9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.76□□□□□ -1.49
HPS3Q969F9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC005294.1-201ENST00000355509 281 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RN7SKP153-201ENST00000365026 316 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 RNU6-171P-201ENST00000384354 107 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HPS3Q969F9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HPS3Q969F9 SNORA48.4-201ENST00000391089 134 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 MIR1178-201ENST00000408396 91 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RN7SKP278-201ENST00000410504 342 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RNA5SP296-201ENST00000410523 111 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RNU6-77P-201ENST00000410554 91 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 OR4K6P-201ENST00000416478 897 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 TRGV6-201ENST00000417928 299 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC048351.1-201ENST00000420064 602 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC108075.1-201ENST00000424692 529 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AL031663.1-201ENST00000437445 219 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.76□□□□□ -1.49
HPS3Q969F9 PTENP1-201ENST00000447117 1215 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 MTCYBP11-201ENST00000447254 1109 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RHEBP2-201ENST00000450289 600 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 HMGB1P4-201ENST00000455362 567 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC093166.2-201ENST00000455969 1017 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC073522.1-201ENST00000483312 377 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC022133.1-201ENST00000490961 571 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RPS24P16-201ENST00000497294 392 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 RPS4XP20-201ENST00000505751 772 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC113347.3-201ENST00000509113 148 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC098976.1-201ENST00000513014 541 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 RNA5SP230-201ENST00000517039 122 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC100784.1-201ENST00000522790 310 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 OR8A2P-201ENST00000528631 952 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.76□□□□□ -1.49
HPS3Q969F9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC090695.1-201ENST00000561269 1222 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC090312.2-201ENST00000582687 378 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 PCNAP1-202ENST00000595299 752 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 IMMP1LP3-201ENST00000604197 224 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC107952.2-201ENST00000606048 486 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC007349.4-201ENST00000608114 532 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC099676.1-201ENST00000608886 657 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AL353726.1-201ENST00000614041 1000 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC023509.5-201ENST00000617434 807 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AP002505.2-201ENST00000623585 696 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AP002967.1-201ENST00000624203 539 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC120349.3-201ENST00000624377 529 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.76□□□□□ -1.49
HPS3Q969F9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
HPS3Q969F9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC092376.2-201ENST00000622621 4116 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 AC096656.1-201ENST00000623826 1364 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 AC073136.1-201ENST00000449426 2884 ntBASIC5.76□□□□□ -1.49
HPS3Q969F9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HPS3Q969F9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC000367.1-201ENST00000452711 1766 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC046144.1-201ENST00000478559 1853 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC093775.1-201ENST00000624154 1868 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC006210.2-201ENST00000367074 1545 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.75□□□□□ -1.49
HPS3Q969F9 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.75□□□□□ -1.49
HPS3Q969F9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 U3.7-201ENST00000363668 216 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 RNU1-43P-201ENST00000365052 165 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 SNORA67-201ENST00000384423 137 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 RNU6-1242P-201ENST00000391052 103 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AL079342.2-201ENST00000403367 482 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.75□□□□□ -1.49
HPS3Q969F9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.75□□□□□ -1.49
HPS3Q969F9 CBX1P4-201ENST00000439415 457 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms