Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-CQ95604 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-CQ95604 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC091046.3-201ENST00000631455 1574 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 Y_RNA.47-201ENST00000362697 108 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 Y_RNA.148-201ENST00000363557 117 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 LCN1P2-201ENST00000372030 223 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 AL121834.1-202ENST00000404494 277 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 MIR1272-201ENST00000408106 129 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 RNU6-370P-201ENST00000411008 104 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 RPS12P24-201ENST00000412619 387 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC108479.1-201ENST00000431142 427 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AF228730.2-201ENST00000438784 848 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
HLA-CQ95604 IGKV1OR-3-201ENST00000446944 348 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 PSPC1P2-201ENST00000455130 225 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-CQ95604 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-CQ95604 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 OR5D15P-201ENST00000531671 942 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 OR5B10P-201ENST00000532869 642 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-CQ95604 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-CQ95604 RN7SL366P-201ENST00000577957 292 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 MIR5690-201ENST00000583739 73 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 MAGOH2P-202ENST00000584384 429 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC105224.1-201ENST00000587055 421 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-CQ95604 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 AC096861.1-201ENST00000616652 240 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 SNX18P12-201ENST00000624821 759 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 SNX18P10-201ENST00000625014 519 ntBASIC7.3□□□□□ -1.24
HLA-CQ95604 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-CQ95604 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-CQ95604 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HLA-CQ95604 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 Y_RNA.176-201ENST00000363815 109 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RNU6-853P-201ENST00000364306 107 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RNU4-20P-201ENST00000365601 151 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AL031679.1-201ENST00000400616 525 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 DHFRP6-201ENST00000401776 268 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RPL31P52-201ENST00000407532 367 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RNU4-61P-201ENST00000411243 107 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RPL37P10-201ENST00000412884 288 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-CQ95604 RPS15AP30-201ENST00000420976 390 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC104698.1-201ENST00000435671 276 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RPL23AP74-201ENST00000437246 471 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 H2AFZP6-201ENST00000444403 394 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 Y_RNA.653-201ENST00000459091 95 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AC010655.3-201ENST00000478818 450 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 SUMO2P4-201ENST00000504193 276 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC091965.3-201ENST00000506236 208 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC109481.1-201ENST00000509173 282 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 MTCYBP40-201ENST00000509390 1135 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms