Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 HSPE1P16-201ENST00000426640 348 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 AL117339.2-201ENST00000430475 180 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 RNA5SP103-201ENST00000459503 118 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 RPS4XP12-201ENST00000461747 709 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 AL132838.2-201ENST00000492041 314 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 AC099522.1-202ENST00000514718 367 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 MTCO1P49-201ENST00000523429 802 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 MIR4444-1-201ENST00000581696 74 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 MIR4444-2-201ENST00000584390 74 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 AL359643.1-201ENST00000404109 423 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 RPS20P14-201ENST00000412545 360 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC006326.1-201ENST00000445465 787 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 AP002812.1-201ENST00000495378 474 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC053481.3-201ENST00000577881 843 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 RN7SL703P-201ENST00000578485 302 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC005034.4-201ENST00000603612 899 ntBASIC5.35□□□□□ -1.55
RTL9Q8NET4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RTL9Q8NET4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL9Q8NET4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RTL9Q8NET4 AL132656.3-201ENST00000606384 1595 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RTL9Q8NET4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RTL9Q8NET4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 AL451062.2-201ENST00000427515 271 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 RNA5SP246-201ENST00000458909 119 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 RNA5SP519-201ENST00000516480 119 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 AC023632.4-201ENST00000517783 191 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 AL160290.3-201ENST00000604869 165 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 Z98200.1-201ENST00000607298 470 ntBASIC5.34□□□□□ -1.55
RTL9Q8NET4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RTL9Q8NET4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.34□□□□□ -1.55
RTL9Q8NET4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.34□□□□□ -1.56
RTL9Q8NET4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RTL9Q8NET4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
RTL9Q8NET4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RTL9Q8NET4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RTL9Q8NET4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
RTL9Q8NET4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RTL9Q8NET4 HSPD1P14-201ENST00000432666 1618 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTL9Q8NET4 RNA5SP175-201ENST00000364275 119 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RTL9Q8NET4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 RNU6-628P-201ENST00000410675 107 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 VDAC1P9-201ENST00000412766 841 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 RPL6P29-201ENST00000414863 865 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 LINC01881-201ENST00000416103 412 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 RPL21P89-201ENST00000444021 467 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 RPL23AP81-201ENST00000455252 467 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 snoU13.22-201ENST00000459428 104 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 ATP5G1P3-201ENST00000463301 410 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 PGBD4P4-201ENST00000509673 613 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 NDUFB4P12-201ENST00000513465 390 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms