Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 HIGD1AP12-201ENST00000427832 281 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC006946.1-201ENST00000429106 328 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC068135.1-201ENST00000446164 246 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC011005.3-201ENST00000491624 395 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC025260.1-201ENST00000548858 430 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC125611.1-201ENST00000549563 229 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC069366.1-201ENST00000583159 838 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC092106.3-201ENST00000611308 722 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL355488.2-201ENST00000609909 2850 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL078621.3-201ENST00000623707 2042 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 MTND5P31-201ENST00000419366 1374 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 MTND4P10-201ENST00000446199 1363 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC016745.2-201ENST00000608834 3443 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AL121950.1-201ENST00000624993 2077 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RNA5SP428-201ENST00000365129 132 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RNU6-185P-201ENST00000384421 107 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 MIR134-201ENST00000385258 73 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 PEX12P1-201ENST00000400284 1048 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RPS27AP11-201ENST00000402798 447 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RNA5SP113-201ENST00000410486 84 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RN7SKP17-201ENST00000411242 351 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AL356320.2-201ENST00000417263 507 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 CENPIP1-201ENST00000425713 902 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RPL36AP15-201ENST00000444514 266 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RPL23AP44-201ENST00000482216 473 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC135279.1-201ENST00000543493 504 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC090695.1-201ENST00000561269 1222 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC023813.2-201ENST00000564321 469 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC069304.3-201ENST00000603938 1084 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AL139344.1-201ENST00000605228 195 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC016877.3-201ENST00000606778 504 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 TUSC7.1-201ENST00000610969 165 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 AC005962.2-201ENST00000611427 652 ntBASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMC1BQ8NDV3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMC1BQ8NDV3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SMC1BQ8NDV3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMC1BQ8NDV3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SMC1BQ8NDV3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMC1BQ8NDV3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms