Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BGLT3-201ENST00000564523 994 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AC022884.3-201ENST00000579571 248 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 VN1R87P-201ENST00000596706 487 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AP002906.1-201ENST00000603405 233 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 Z82195.1-201ENST00000604558 398 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 OR2BH1P-201ENST00000608850 864 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL078595.3-201ENST00000623815 1166 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 ZNF849P-201ENST00000594711 1566 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LRRC37BP1-201ENST00000398851 714 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC105402.1-201ENST00000413336 545 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 GTF2IP5-201ENST00000414608 731 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LIPT1P1-201ENST00000415870 1186 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC009506.2-201ENST00000420635 840 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC093414.1-201ENST00000434712 514 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 RPL12P18-201ENST00000437175 325 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AL450023.3-201ENST00000440592 271 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 COX6B1P2-201ENST00000489624 230 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 RPS27AP16-201ENST00000492222 470 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 CDH12P4-201ENST00000517835 295 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 CDH12P3-201ENST00000517935 295 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 CDH12P1-201ENST00000518435 295 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC020910.3-201ENST00000603701 874 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AC087283.1-201ENST00000604029 1074 ntBASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN4BQ8IWT1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SCN4BQ8IWT1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SCN4BQ8IWT1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SCN4BQ8IWT1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.21□□□□□ -1.57
SCN4BQ8IWT1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SCN4BQ8IWT1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SCN4BQ8IWT1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 A2MP1-204ENST00000566278 4130 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 METTL21EP-201ENST00000298105 713 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 U6.112-201ENST00000384129 70 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 RNU6-185P-201ENST00000384421 107 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AL603865.2-201ENST00000401679 213 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AP000357.1-201ENST00000409926 1165 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 HMGB3P31-201ENST00000413333 595 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AC079809.1-201ENST00000415468 276 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 MTCO1P52-201ENST00000433928 531 ntBASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.21□□□□□ -1.58
SCN4BQ8IWT1 AL358794.1-201ENST00000445689 381 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms