Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 BUD31P1-201ENST00000521828 359 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC021006.3-201ENST00000530771 192 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 OR4R2P-201ENST00000530815 597 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 MTND4LP25-201ENST00000570218 163 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC110743.1-201ENST00000584870 478 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC087283.1-201ENST00000604029 1074 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 MEMO1P5-201ENST00000604810 406 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC087385.3-201ENST00000620477 187 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC005332.5-201ENST00000591222 2919 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC012618.3-205ENST00000637896 1496 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AL133268.1-201ENST00000405676 1401 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC114546.3-201ENST00000623582 1734 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AL445437.1-201ENST00000623157 3087 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 BMS1P3-201ENST00000372011 932 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AL021331.1-201ENST00000402817 582 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 RNU4-27P-201ENST00000410889 139 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 RN7SKP97-201ENST00000410966 333 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 SETP15-201ENST00000412724 337 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC019050.1-201ENST00000418508 492 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC023128.2-201ENST00000420880 1223 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC008072.1-201ENST00000434254 824 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC073052.1-201ENST00000440417 714 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 OR7E125P-201ENST00000443450 846 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 RPL6P5-201ENST00000445678 828 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AL031584.1-201ENST00000447169 754 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC090686.1-201ENST00000481577 749 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC112518.2-201ENST00000508565 425 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC133963.2-201ENST00000513686 578 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 OR5AK3P-201ENST00000527486 1297 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AL121594.4-201ENST00000556211 1196 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AP005262.1-201ENST00000582646 997 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC115085.1-201ENST00000588924 229 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC084824.5-201ENST00000612009 413 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC006042.3-201ENST00000454684 1469 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF39Q86UA1 MTCO1P18-201ENST00000455518 1419 ntBASIC5.06□□□□□ -1.6
PRPF39Q86UA1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AL137100.1-201ENST00000556703 1620 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 SDAD1P1-202ENST00000524156 2051 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms