Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 PCNAP1-202ENST00000595299 752 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC211433.2-201ENST00000608433 387 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AL023881.1-201ENST00000621088 301 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 GCNT6-201ENST00000379591 934 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RNU1-106P-201ENST00000384382 164 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RNU6-796P-201ENST00000391086 107 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 Z97832.1-201ENST00000402490 328 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL035079.1-201ENST00000405210 287 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RN7SKP278-201ENST00000410504 342 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 DPPA2P3-201ENST00000411853 655 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL158825.1-201ENST00000414735 521 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC234782.4-201ENST00000417646 1048 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RPS6P14-201ENST00000425165 719 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RPL35AP21-201ENST00000437667 333 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC092647.3-201ENST00000443044 633 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC069540.1-201ENST00000446320 988 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RPL32P14-201ENST00000463196 378 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL161747.1-201ENST00000480068 358 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC112518.2-201ENST00000508565 425 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC133963.2-201ENST00000513686 578 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RNA5SP360-201ENST00000516555 118 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 DEFB109D-201ENST00000529497 240 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 OR7E128P-201ENST00000532736 1024 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC079610.2-201ENST00000604818 690 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AP005432.2-201ENST00000608162 586 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC004948.1-201ENST00000609858 672 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 EIF3FP1-201ENST00000613970 806 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC018445.2-201ENST00000622987 260 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC068880.4-201ENST00000623082 495 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AL136520.1-201ENST00000600311 1322 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC008432.1-201ENST00000615912 1320 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 AC100871.1-201ENST00000507871 1456 ntBASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NUP54Q7Z3B4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 SNORA70-201ENST00000384436 135 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AL078599.1-201ENST00000402075 293 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 PNRC2P1-201ENST00000423940 420 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms