Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 AC074101.1-201ENST00000637861 241 ntBASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP4Q6PIL6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 ERCC6-202ENST00000374127 1782 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 OR11H5P-202ENST00000641612 1325 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 SNORA66-201ENST00000384792 133 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 OR7E156P-201ENST00000400303 464 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LYPLA1P3-201ENST00000402650 695 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 RN7SKP216-201ENST00000411050 312 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC066692.1-201ENST00000421721 457 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 GAPDHP25-201ENST00000447061 1001 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC126121.1-201ENST00000482313 553 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC134349.2-201ENST00000535136 910 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC107958.1-201ENST00000556576 290 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 MRPS21P7-201ENST00000566937 238 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AP000919.1-202ENST00000581139 1264 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AL671309.1-201ENST00000603750 544 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC005191.1-201ENST00000603950 358 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 PPATP2-201ENST00000605635 508 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 MIR6778-201ENST00000617912 73 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 MIR6864-201ENST00000617935 70 ntBASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP4Q6PIL6 ECM1P2-201ENST00000503354 1577 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 AC114786.1-201ENST00000512892 1415 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 RNA5SP319-201ENST00000362768 119 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 RN7SKP113-201ENST00000363891 295 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 RNA5SP122-201ENST00000384457 108 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 RNU6-796P-201ENST00000391086 107 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 AL645733.1-201ENST00000402250 217 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 HMGB1P20-201ENST00000402555 677 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 U3.35-201ENST00000408405 208 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 MIR1303-201ENST00000408625 86 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 RNU2-21P-201ENST00000410368 188 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 UBE2V1P11-201ENST00000411559 285 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 PRELID3BP11-201ENST00000414230 479 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 QRSL1P2-201ENST00000418582 964 ntBASIC3.8□□□□□ -1.8
KCNIP4Q6PIL6 AC004552.1-201ENST00000419089 348 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms