Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 SNORA73.2-201ENST00000364946 201 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 SNORA5A-201ENST00000384111 134 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AL133268.1-201ENST00000405676 1401 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 RN7SKP156-201ENST00000410308 342 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 YME1L1P1-201ENST00000429435 297 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC091286.1-201ENST00000431233 461 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 PRSS3P4-201ENST00000453323 162 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC010503.3-201ENST00000594355 540 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC005086.4-201ENST00000623065 213 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 RNA5SP399-201ENST00000364003 117 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 SNORD66.1-201ENST00000391230 76 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC026726.1-201ENST00000512859 601 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC138832.1-201ENST00000522871 556 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC112230.1-201ENST00000604342 547 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 AC069200.1-201ENST00000609511 323 ntBASIC6.28□□□□□ -1.4
CDC42BPAQ5VT25 HSPD1P14-201ENST00000432666 1618 ntBASIC6.27□□□□□ -1.4
CDC42BPAQ5VT25 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CDC42BPAQ5VT25 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 RNA5SP22-201ENST00000365393 109 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 AL672167.2-201ENST00000377164 879 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 MIR449B-201ENST00000384995 97 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 RPL7P1-201ENST00000468161 747 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 RPL7P9-201ENST00000468715 747 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 AC090151.1-201ENST00000520784 730 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 FP236240.3-201ENST00000623061 327 ntBASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDC42BPAQ5VT25 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 NCOA4P2-201ENST00000340589 1813 ntBASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 HPRT1P2-201ENST00000505250 544 ntBASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 AC015967.1-201ENST00000619893 476 ntBASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 FAM91A3P-201ENST00000456826 2544 ntBASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDC42BPAQ5VT25 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 RN7SKP141-201ENST00000516167 338 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 IGKV2D-19-201ENST00000523346 262 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC027176.2-201ENST00000559166 746 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC015871.5-202ENST00000623252 701 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 U3.23-201ENST00000391132 200 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 OR4F13P-201ENST00000428478 931 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 RPL23AP25-201ENST00000430973 463 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 RPL7P15-201ENST00000461190 712 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 RPS20P21-201ENST00000466859 343 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 AC024220.1-201ENST00000603675 484 ntBASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDC42BPAQ5VT25 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms