Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 RPS26P40-201ENST00000435209 294 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AL356390.1-201ENST00000455684 397 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 PARP4P3-201ENST00000510265 317 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 SCARNA21.2-201ENST00000516600 166 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 OR5AZ1P-201ENST00000527448 943 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 PHBP17-201ENST00000528576 541 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC067838.1-201ENST00000606064 577 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AP000864.1-201ENST00000609424 650 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 U3.53-201ENST00000628922 216 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 ZNF137P-201ENST00000456718 1920 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC58Q4VC31 CPHL1P-201ENST00000461341 3407 ntBASIC3.96□□□□□ -1.77
CCDC58Q4VC31 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC58Q4VC31 AL929601.4-201ENST00000613011 1341 ntBASIC3.96□□□□□ -1.77
CCDC58Q4VC31 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.96□□□□□ -1.77
CCDC58Q4VC31 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC58Q4VC31 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC58Q4VC31 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 RNU1-87P-201ENST00000363727 170 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 RN7SKP15-201ENST00000364742 309 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 SNORA71.2-201ENST00000364941 134 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 RN7SKP269-201ENST00000365545 319 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 RNU1-106P-201ENST00000384382 164 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 GLULP6-201ENST00000399502 913 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 RPS23P10-201ENST00000416185 486 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC019050.1-201ENST00000418508 492 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 OR2B7P-201ENST00000429302 934 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 PRELID3BP10-201ENST00000431957 584 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC016831.4-201ENST00000438302 307 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 OR1H1P-201ENST00000448731 937 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 ANP32BP2-201ENST00000454525 545 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC008033.2-201ENST00000542626 177 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AL110118.1-201ENST00000553543 400 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC010547.7-201ENST00000570323 333 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AL121612.2-201ENST00000612261 482 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 NOL8P1-201ENST00000508336 3529 ntBASIC3.96□□□□□ -1.78
CCDC58Q4VC31 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC58Q4VC31 AC092162.3-201ENST00000624511 1624 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 BX005019.1-201ENST00000561881 1810 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 PHKBP1-201ENST00000450951 1951 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 MTCO1P14-201ENST00000441695 1559 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 AC108467.2-201ENST00000617640 1597 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 A2MP1-204ENST00000566278 4130 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 RNA5SP305-201ENST00000362665 119 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 RNU4-4P-201ENST00000364588 130 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 AL391361.1-201ENST00000405580 489 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC58Q4VC31 AC093162.1-201ENST00000419682 124 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 AC092647.1-201ENST00000420654 287 ntBASIC3.95□□□□□ -1.78
CCDC58Q4VC31 AL159169.1-201ENST00000421119 127 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms