Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 ANKRD26P4-201ENST00000455755 950 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC008953.1-201ENST00000497334 318 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 FABP5P12-201ENST00000515543 389 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 CDC42P3-201ENST00000518493 633 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 MTND2P26-201ENST00000528255 1029 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 MIR5708-201ENST00000579723 85 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 RN7SL356P-201ENST00000582228 248 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 MIR4443-201ENST00000585052 53 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AL392112.1-201ENST00000605115 829 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC211433.2-201ENST00000608433 387 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC100847.1-201ENST00000611316 481 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC009090.3-201ENST00000616553 565 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC016769.4-201ENST00000616893 535 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC009318.3-201ENST00000616916 503 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AC099654.6-201ENST00000636487 512 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 AL078621.3-201ENST00000623707 2042 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 DDX18P5-201ENST00000534547 1306 ntBASIC5.23□□□□□ -1.57
PTCHD3Q3KNS1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 Y_RNA.169-201ENST00000363745 96 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 RNA5SP335-201ENST00000363817 110 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AL133388.1-201ENST00000404509 287 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 RNU4-34P-201ENST00000410431 124 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AL390774.1-201ENST00000411924 246 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 RPL7AP49-201ENST00000429522 581 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 UBE2V1P1-201ENST00000430836 445 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AL591438.1-201ENST00000433508 581 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AL627308.1-201ENST00000435693 821 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 GTF2IP7-202ENST00000436677 309 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC016772.1-201ENST00000444170 1261 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 HMGB1P48-201ENST00000446155 598 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 MRPL42P4-201ENST00000453267 443 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 SEPT7P3-201ENST00000455017 621 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC011979.1-201ENST00000472300 483 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AP000797.2-201ENST00000475768 606 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC126121.1-201ENST00000482313 553 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC006499.3-201ENST00000506077 748 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 OR5M14P-201ENST00000506803 618 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 MTCO3P28-201ENST00000513351 515 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 NDUFB4P12-201ENST00000513465 390 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC023632.1-201ENST00000518463 375 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 PDCL2P2-201ENST00000533651 189 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AP002373.2-201ENST00000541631 1060 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 BLZF2P-201ENST00000553776 1130 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AC044913.1-201ENST00000557200 430 ntBASIC5.22□□□□□ -1.57
PTCHD3Q3KNS1 AADACP1-206ENST00000561502 1193 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms