Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC110792.3-201ENST00000595906 1614 ntBASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 AC092079.1-201ENST00000558620 1985 ntBASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 AL672167.1-204ENST00000641875 3017 ntBASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 ASNSP1-201ENST00000518311 1939 ntBASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 LINC00622-201ENST00000562811 1570 ntBASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 AC091046.3-201ENST00000631455 1574 ntBASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHROOM1Q2M3G4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 OR5P1P-201ENST00000299512 925 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP151-201ENST00000365632 117 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 RPL17P36-201ENST00000420302 549 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AP000936.3-201ENST00000438127 255 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 TPT1P1-201ENST00000458495 518 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AF186190.1-201ENST00000517470 480 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 PDCD5P1-201ENST00000543528 309 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC021483.2-201ENST00000567415 758 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC138473.1-201ENST00000605717 526 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 ZYXP1-201ENST00000617638 118 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC015914.2-201ENST00000618167 288 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP196-201ENST00000625967 102 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 AC007342.7-201ENST00000624610 2337 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 EIF2AP4-201ENST00000424793 1781 ntBASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHROOM1Q2M3G4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 MAPK10-304ENST00000641341 3984 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 RN7SKP227-201ENST00000364445 330 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP317-201ENST00000410176 116 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP311-201ENST00000411290 116 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 ARAFP1-201ENST00000422172 605 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP315-201ENST00000516340 116 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP312-201ENST00000517068 116 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 MIR1254-2-201ENST00000579553 63 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AL354984.3-201ENST00000604803 325 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AL591034.3-201ENST00000605511 685 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AL139254.3-201ENST00000641097 674 ntBASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHROOM1Q2M3G4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL731532.2-201ENST00000623542 1953 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AC125257.1-201ENST00000560400 2930 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AC009951.1-201ENST00000623674 2614 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 RNA5SP366-201ENST00000365454 123 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL161909.1-201ENST00000397390 712 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL592291.1-201ENST00000403830 352 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 MTND6P18-201ENST00000439477 513 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 ACTR3P2-201ENST00000439585 1257 ntBASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM1Q2M3G4 UQCRHP4-201ENST00000471686 272 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms