Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 COX6B1P3-201ENST00000312310 260 ntBASIC5.84□□□□□ -1.47
YBX1P67809 RNU6-621P-201ENST00000364752 109 ntBASIC5.84□□□□□ -1.47
YBX1P67809 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.84□□□□□ -1.47
YBX1P67809 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.84□□□□□ -1.47
YBX1P67809 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.84□□□□□ -1.47
YBX1P67809 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.84□□□□□ -1.47
YBX1P67809 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 AC245884.2-201ENST00000426257 404 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AC104843.2-201ENST00000427666 297 ntBASIC5.84□□□□□ -1.47
YBX1P67809 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.84□□□□□ -1.47
YBX1P67809 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.84□□□□□ -1.47
YBX1P67809 SEPT7P5-201ENST00000434048 306 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AC092427.1-201ENST00000439177 601 ntBASIC5.84□□□□□ -1.47
YBX1P67809 ATP5LP2-201ENST00000440646 311 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.84□□□□□ -1.47
YBX1P67809 RPL7P36-201ENST00000444633 681 ntBASIC5.84□□□□□ -1.47
YBX1P67809 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 RPL30P9-201ENST00000465586 330 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AC094085.1-201ENST00000468914 584 ntBASIC5.84□□□□□ -1.47
YBX1P67809 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.84□□□□□ -1.47
YBX1P67809 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.84□□□□□ -1.47
YBX1P67809 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.84□□□□□ -1.47
YBX1P67809 CYP4F27P-201ENST00000514557 494 ntBASIC5.84□□□□□ -1.47
YBX1P67809 IGHV3-32-201ENST00000519182 355 ntBASIC5.84□□□□□ -1.47
YBX1P67809 TPM3P3-201ENST00000521343 354 ntBASIC5.84□□□□□ -1.47
YBX1P67809 OR4C2P-201ENST00000530855 1064 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AC079905.1-201ENST00000549280 475 ntBASIC5.84□□□□□ -1.47
YBX1P67809 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 CYCSP38-201ENST00000559840 322 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AC092332.1-201ENST00000563684 829 ntBASIC5.84□□□□□ -1.47
YBX1P67809 MTCO3P13-201ENST00000577757 781 ntBASIC5.84□□□□□ -1.47
YBX1P67809 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.84□□□□□ -1.47
YBX1P67809 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.84□□□□□ -1.47
YBX1P67809 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 uc_338.26-201ENST00000612659 160 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AC002553.4-201ENST00000616896 331 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AL445670.1-201ENST00000618889 801 ntBASIC5.84□□□□□ -1.47
YBX1P67809 AL158209.2-201ENST00000619266 216 ntBASIC5.84□□□□□ -1.47
YBX1P67809 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 AC245100.2-201ENST00000454544 1679 ntBASIC5.84□□□□□ -1.47
YBX1P67809 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.84□□□□□ -1.47
YBX1P67809 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
YBX1P67809 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.84□□□□□ -1.47
YBX1P67809 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.84□□□□□ -1.48
YBX1P67809 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
YBX1P67809 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.84□□□□□ -1.48
YBX1P67809 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
YBX1P67809 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
YBX1P67809 AC131971.1-201ENST00000332881 1482 ntBASIC5.83□□□□□ -1.48
YBX1P67809 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 CASC19-280ENST00000642102 1351 ntBASIC5.83□□□□□ -1.48
YBX1P67809 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 Y_RNA.38-201ENST00000362617 102 ntBASIC5.83□□□□□ -1.48
YBX1P67809 RNU105B-201ENST00000364478 208 ntBASIC5.83□□□□□ -1.48
YBX1P67809 Y_RNA.372-201ENST00000365599 102 ntBASIC5.83□□□□□ -1.48
YBX1P67809 MT-TL1-201ENST00000386347 75 ntBASIC5.83□□□□□ -1.48
YBX1P67809 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.83□□□□□ -1.48
YBX1P67809 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.83□□□□□ -1.48
YBX1P67809 AC245096.1-201ENST00000413104 546 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 RPA2P2-201ENST00000419698 796 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AL590399.2-201ENST00000427536 309 ntBASIC5.83□□□□□ -1.48
YBX1P67809 RPL12P16-201ENST00000431098 498 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AL050321.1-201ENST00000432363 400 ntBASIC5.83□□□□□ -1.48
YBX1P67809 LYPLA1P1-201ENST00000434514 622 ntBASIC5.83□□□□□ -1.48
YBX1P67809 RPS3AP38-201ENST00000435889 763 ntBASIC5.83□□□□□ -1.48
YBX1P67809 HMGB1P45-201ENST00000435986 653 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 CALM1P2-201ENST00000452941 448 ntBASIC5.83□□□□□ -1.48
YBX1P67809 RANP1-206ENST00000455094 651 ntBASIC5.83□□□□□ -1.48
YBX1P67809 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 AC098847.1-201ENST00000473094 348 ntBASIC5.83□□□□□ -1.48
YBX1P67809 VPS26AP1-201ENST00000483197 979 ntBASIC5.83□□□□□ -1.48
YBX1P67809 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
YBX1P67809 RPL7P24-201ENST00000493052 752 ntBASIC5.83□□□□□ -1.48
YBX1P67809 MTCYBP17-201ENST00000503579 789 ntBASIC5.83□□□□□ -1.48
YBX1P67809 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 MTND3P22-201ENST00000510932 243 ntBASIC5.83□□□□□ -1.48
YBX1P67809 TOMM22P4-201ENST00000511318 336 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms