Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.93□□□□□ -1.78
ACTBP60709 AC092045.1-201ENST00000495716 1231 ntBASIC3.93□□□□□ -1.78
ACTBP60709 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 OR5M14P-201ENST00000506803 618 ntBASIC3.93□□□□□ -1.78
ACTBP60709 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.93□□□□□ -1.78
ACTBP60709 TOMM20P2-201ENST00000540082 421 ntBASIC3.93□□□□□ -1.78
ACTBP60709 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.93□□□□□ -1.78
ACTBP60709 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.93□□□□□ -1.78
ACTBP60709 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.93□□□□□ -1.78
ACTBP60709 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.93□□□□□ -1.78
ACTBP60709 MIR5699-201ENST00000578903 90 ntBASIC3.93□□□□□ -1.78
ACTBP60709 AP001521.2-201ENST00000608772 546 ntBASIC3.93□□□□□ -1.78
ACTBP60709 AL096803.3-201ENST00000609032 532 ntBASIC3.93□□□□□ -1.78
ACTBP60709 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.93□□□□□ -1.78
ACTBP60709 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.93□□□□□ -1.78
ACTBP60709 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.93□□□□□ -1.78
ACTBP60709 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.93□□□□□ -1.78
ACTBP60709 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.93□□□□□ -1.78
ACTBP60709 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 AC053481.2-202ENST00000582394 1500 ntBASIC3.93□□□□□ -1.78
ACTBP60709 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ACTBP60709 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.93□□□□□ -1.78
ACTBP60709 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
ACTBP60709 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACTBP60709 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
ACTBP60709 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTBP60709 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTBP60709 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTBP60709 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 RNU1-15P-201ENST00000353977 144 ntBASIC3.92□□□□□ -1.78
ACTBP60709 RN7SKP95-201ENST00000362860 303 ntBASIC3.92□□□□□ -1.78
ACTBP60709 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 MIR105-2-201ENST00000385083 81 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AL645733.1-201ENST00000402250 217 ntBASIC3.92□□□□□ -1.78
ACTBP60709 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTBP60709 CHEK2P3-201ENST00000416118 248 ntBASIC3.92□□□□□ -1.78
ACTBP60709 NDUFA5P1-201ENST00000433858 341 ntBASIC3.92□□□□□ -1.78
ACTBP60709 LYPLA1P1-201ENST00000434514 622 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.92□□□□□ -1.78
ACTBP60709 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 AC069277.2-201ENST00000454211 432 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.92□□□□□ -1.78
ACTBP60709 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.92□□□□□ -1.78
ACTBP60709 AC020593.1-201ENST00000507399 299 ntBASIC3.92□□□□□ -1.78
ACTBP60709 MRPS33P2-201ENST00000507850 322 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.92□□□□□ -1.78
ACTBP60709 OR51K1P-201ENST00000510214 950 ntBASIC3.92□□□□□ -1.78
ACTBP60709 PARP4P3-201ENST00000510265 317 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 IGLVIV-53-201ENST00000520107 367 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 RFPL1S-203ENST00000539579 330 ntBASIC3.92□□□□□ -1.78
ACTBP60709 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.92□□□□□ -1.78
ACTBP60709 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 VN1R84P-201ENST00000593697 235 ntBASIC3.92□□□□□ -1.78
ACTBP60709 SNX6P1-201ENST00000601728 1224 ntBASIC3.92□□□□□ -1.78
ACTBP60709 AP003072.5-201ENST00000623872 773 ntBASIC3.92□□□□□ -1.78
ACTBP60709 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.92□□□□□ -1.78
ACTBP60709 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTBP60709 MAPK10-263ENST00000641052 4307 ntBASIC3.92□□□□□ -1.78
ACTBP60709 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACTBP60709 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
ACTBP60709 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACTBP60709 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.91□□□□□ -1.78
ACTBP60709 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
ACTBP60709 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ACTBP60709 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.91□□□□□ -1.78
ACTBP60709 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACTBP60709 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ACTBP60709 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACTBP60709 RNU6-673P-201ENST00000365084 104 ntBASIC3.91□□□□□ -1.78
ACTBP60709 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACTBP60709 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.91□□□□□ -1.78
ACTBP60709 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.91□□□□□ -1.78
ACTBP60709 AC004552.1-201ENST00000419089 348 ntBASIC3.91□□□□□ -1.78
ACTBP60709 CYP4F29P-201ENST00000420685 446 ntBASIC3.91□□□□□ -1.78
ACTBP60709 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.91□□□□□ -1.78
ACTBP60709 MTCO3P21-201ENST00000430791 643 ntBASIC3.91□□□□□ -1.78
ACTBP60709 RPL7P11-201ENST00000437586 658 ntBASIC3.91□□□□□ -1.78
ACTBP60709 AC112498.1-201ENST00000444401 332 ntBASIC3.91□□□□□ -1.78
ACTBP60709 TRY2P-201ENST00000448860 689 ntBASIC3.91□□□□□ -1.78
ACTBP60709 AC239809.1-201ENST00000450470 217 ntBASIC3.91□□□□□ -1.78
ACTBP60709 VN1R32P-201ENST00000452234 905 ntBASIC3.91□□□□□ -1.78
ACTBP60709 RPL23AP56-201ENST00000460778 453 ntBASIC3.91□□□□□ -1.78
ACTBP60709 RPS26P3-201ENST00000470205 348 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms